Difference between revisions of "TSS:Hg 100395.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=24 |entrez_id=10210 |gc_percent=0.532338 |gene_alias=LUN|P53BP3|RP31|TP53BPL |gene_description=TOP1 binding arginine/serine ric...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P53BP3= | ||
| + | |RP31= | ||
| + | |TP53BPL= | ||
| + | |all_trans=NM_005802:0 NM_001195622:0 BC060884:12 ENST00000360538.6:27 ENST00000379858.1:27 uc003zrb.4:27 uc003zrc.4:27 AB045732:27 AB045733:27 AF098300:27 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| + | |end=32552629 | ||
|entrez_id=10210 | |entrez_id=10210 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=LUN|P53BP3|RP31|TP53BPL | |gene_alias=LUN|P53BP3|RP31|TP53BPL | ||
|gene_description=TOP1 binding arginine/serine rich protein | |gene_description=TOP1 binding arginine/serine rich protein | ||
| − | |gene_name=TOPORS | + | |gene_id=10210 |
| + | |gene_name="topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" | ||
| + | |gene_source=HGNC:21653 | ||
| + | |gene_symbol=TOPORS | ||
| + | |gene_synonyms=LUN TP53BPL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21653 | ||
|nearest_ensembl=ENSG00000197579 | |nearest_ensembl=ENSG00000197579 | ||
|nearest_promoter_id=NM_001195622 | |nearest_promoter_id=NM_001195622 | ||
|nearest_refseq=NM_005802 | |nearest_refseq=NM_005802 | ||
|nearest_unigene=Hs.589962 | |nearest_unigene=Hs.589962 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=32552579 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_005802 NM_001195622 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100395.1 | |tss_id=hg_100395.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9NS56 | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_005802 NM_001195622 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | NM_005802:0 NM_001195622:0 BC060884:12 ENST00000360538.6:27 ENST00000379858.1:27 uc003zrb.4:27 uc003zrc.4:27 AB045732:27 AB045733:27 AF098300:27 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_001195622 |
| Entrez ID: | 10210 |
| Nearest Unigene: | Hs.589962 |
| Nearest Refseq: | NM_005802 |
| Nearest Ensembl: | ENSG00000197579 |
| Gene Name: | "topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" |
| Gene Alias: | LUN |
| Gene Description: | TOP1 binding arginine/serine rich protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
