Difference between revisions of "TSS:Hg 625.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Fbx44= | |Fbx44= | ||
|Fbxo6a= | |Fbxo6a= | ||
| − | |all_trans=AK294053:-98 ENST00000376760.5:-113 ENST00000376762.8 | + | |all_trans=AK294053:-98 ENST00000376760.5:-113 ENST00000376762.8:-113 BC007832:-113 AK293721:-114 AY040878:-122 AK316347:-123 ENST00000376768.5:-142 ENST00000251547.10:-146 NM_033182:-146 AK296025:-146 AK301418:-146 AK316284:-146 CR749368:-154 ENST00000425796.5:-166 ENST00000376770.5:-166 NR_130909:-166 NM_001304790:-166 NM_001330355:-166 NM_001014765:-166 NM_183413:-166 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=-98 | |distance=-98 | ||
| − | |distance_to_tss= | + | |distance_to_tss=152 |
|end=11655035 | |end=11655035 | ||
|end_of_center_position=11655029 | |end_of_center_position=11655029 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=FBG3 | + | |gene_alias=FBG3{{!}}FBX30{{!}}FBX6A{{!}}Fbx44{{!}}Fbxo6a |
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
|gene_id=93611 | |gene_id=93611 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:24847 | |hgnc_mgi_id=HGNC:24847 | ||
|nearest_ensembl=ENSG00000132879 | |nearest_ensembl=ENSG00000132879 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_033182 |
|nearest_refseq=NM_033182 | |nearest_refseq=NM_033182 | ||
|nearest_unigene=Hs.556006 | |nearest_unigene=Hs.556006 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=11655022 | |start=11655022 | ||
Revision as of 07:43, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11655028 |
|---|---|
| End of the center position in the TSS region: | 11655029 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK294053 |
|---|---|
| Distance: | -98 |
| Num_trans: | 21 |
| All_trans: | AK294053:-98 ENST00000376760.5:-113 ENST00000376762.8:-113 BC007832:-113 AK293721:-114 AY040878:-122 AK316347:-123 ENST00000376768.5:-142 ENST00000251547.10:-146 NM_033182:-146 AK296025:-146 AK301418:-146 AK316284:-146 CR749368:-154 ENST00000425796.5:-166 ENST00000376770.5:-166 NR_130909:-166 NM_001304790:-166 NM_001330355:-166 NM_001014765:-166 NM_183413:-166 |
TATA-Box annotation
| Distance to TSS: | 152 |
|---|---|
| Nearest PromoterID: | NM_033182 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 44 |
| Gene Alias: | FBG3|FBX30|FBX6A|Fbx44|Fbxo6a |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
