Difference between revisions of "TSS:Hg 10317.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=JQ429447:-22 | + | |all_trans=JQ429447:-22 ENST00000641820.1:-77 LF357344:254 MA592921:254 LF357345:448 MA592922:448 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 12: | Line 12: | ||
|gene_description=methylenetetrahydrofolate reductase | |gene_description=methylenetetrahydrofolate reductase | ||
|gene_id=4524 | |gene_id=4524 | ||
| − | |gene_name=methylenetetrahydrofolate reductase | + | |gene_name=methylenetetrahydrofolate reductase |
|gene_source=HGNC:7436 | |gene_source=HGNC:7436 | ||
|gene_symbol=MTHFR | |gene_symbol=MTHFR | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005957 | |nearest_refseq=NM_005957 | ||
|nearest_unigene=Hs.214142 | |nearest_unigene=Hs.214142 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=11796456 | |start=11796456 | ||
| Line 31: | Line 31: | ||
|tss_id=hg_10317.1 | |tss_id=hg_10317.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11796462 |
|---|---|
| End of the center position in the TSS region: | 11796463 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | JQ429447 |
|---|---|
| Distance: | -22 |
| Num_trans: | 6 |
| All_trans: | JQ429447:-22 ENST00000641820.1:-77 LF357344:254 MA592921:254 LF357345:448 MA592922:448 |
TATA-Box annotation
| Distance to TSS: | 7215 |
|---|---|
| Nearest PromoterID: | NM_001330358 |
| Entrez ID: | 4524 |
| Nearest Unigene: | Hs.214142 |
| Nearest Refseq: | NM_005957 |
| Nearest Ensembl: | ENSG00000177000 |
| Gene Name: | methylenetetrahydrofolate reductase |
| Gene Alias: | - |
| Gene Description: | methylenetetrahydrofolate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
