Difference between revisions of "TSS:Hg 13968.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000358528.8:0 ENST00000525132.1:0 uc001efk.4:0 uc057jqg.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 uc001efn.4:-5 BC017662:-5 BC032446:-5 AK022...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |UNR= | ||
|all_trans=ENST00000358528.8:0 ENST00000525132.1:0 uc001efk.4:0 uc057jqg.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 uc001efn.4:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 uc009wgv.4:-13 AK290146:-13 ENST00000339438.10:-14 uc001efl.4:-14 BX648780:-14 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 uc057jqf.1:-18 uc057jqj.1:-18 uc057jqk.1:-18 uc057jql.1:-18 ENST00000369530.5:-34 uc001efm.4:-34 ENST00000530886.5:-58 uc057jqa.1:-58 ENST00000610726.4:-81 NM_001242892:-81 NM_001130523:-81 NM_007158:-81 NM_001242893:-81 NM_001242891:-81 NM_001007553:-81 uc001efi.4:-81 | |all_trans=ENST00000358528.8:0 ENST00000525132.1:0 uc001efk.4:0 uc057jqg.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 uc001efn.4:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 uc009wgv.4:-13 AK290146:-13 ENST00000339438.10:-14 uc001efl.4:-14 BX648780:-14 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 uc057jqf.1:-18 uc057jqj.1:-18 uc057jqk.1:-18 uc057jql.1:-18 ENST00000369530.5:-34 uc001efm.4:-34 ENST00000530886.5:-58 uc057jqa.1:-58 ENST00000610726.4:-81 NM_001242892:-81 NM_001130523:-81 NM_007158:-81 NM_001242893:-81 NM_001242891:-81 NM_001007553:-81 uc001efi.4:-81 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=86 | |distance_to_tss=86 | ||
|end=114757969 | |end=114757969 | ||
| + | |end_of_center_position=114757964 | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
|gene_id=7812 | |gene_id=7812 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=114757958 | |start=114757958 | ||
| + | |start_of_center_position=114757963 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000358528.8 ENST00000525132.1 uc001efk.4 uc057jqg.1 AB020692 | |transcript_name=ENST00000358528.8 ENST00000525132.1 uc001efk.4 uc057jqg.1 AB020692 | ||
Revision as of 06:29, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114757963 |
|---|---|
| End of the center position in the TSS region: | 114757964 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358528.8 ENST00000525132.1 uc001efk.4 uc057jqg.1 AB020692 |
|---|---|
| Distance: | 0 |
| Num_trans: | 39 |
| All_trans: | ENST00000358528.8:0 ENST00000525132.1:0 uc001efk.4:0 uc057jqg.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 uc001efn.4:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 uc009wgv.4:-13 AK290146:-13 ENST00000339438.10:-14 uc001efl.4:-14 BX648780:-14 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 uc057jqf.1:-18 uc057jqj.1:-18 uc057jqk.1:-18 uc057jql.1:-18 ENST00000369530.5:-34 uc001efm.4:-34 ENST00000530886.5:-58 uc057jqa.1:-58 ENST00000610726.4:-81 NM_001242892:-81 NM_001130523:-81 NM_007158:-81 NM_001242893:-81 NM_001242891:-81 NM_001007553:-81 uc001efi.4:-81 |
TATA-Box annotation
| Distance to TSS: | 86 |
|---|---|
| Nearest PromoterID: | NM_001242892 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | cold shock domain containing E1 |
| Gene Alias: | D1S155E |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
