Difference between revisions of "TSS:Hg 223495.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SDR1= | |SDR1= | ||
|SDR16C1= | |SDR16C1= | ||
| − | |all_trans= | + | |all_trans=BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 ENST00000616661.5:-350 NM_004753:-350 BC002730:372 AK222593:433 AF061741:434 CU678154:486 KJ897985:487 DQ893006:487 DQ896252:487 DQ426869:492 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=104 | |distance=104 | ||
| − | |distance_to_tss= | + | |distance_to_tss=363 |
|end=12617860 | |end=12617860 | ||
|end_of_center_position=12617848 | |end_of_center_position=12617848 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=DD83.1 | + | |gene_alias=DD83.1{{!}}RDH17{{!}}Rsdr1{{!}}SDR1{{!}}SDR16C1{{!}}retSDR1 |
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
|gene_id=9249 | |gene_id=9249 | ||
| − | |gene_name=dehydrogenase/reductase | + | |gene_name=dehydrogenase/reductase 3 |
|gene_source=HGNC:17693 | |gene_source=HGNC:17693 | ||
|gene_symbol=DHRS3 | |gene_symbol=DHRS3 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| − | |num_trans= | + | |num_trans=15 |
|retSDR1= | |retSDR1= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=12617847 | |start_of_center_position=12617847 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BX648476 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_223495.1 | |tss_id=hg_223495.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:59, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12617847 |
|---|---|
| End of the center position in the TSS region: | 12617848 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648476 |
|---|---|
| Distance: | 104 |
| Num_trans: | 15 |
| All_trans: | BX648476:104 AK312961:149 AK309282:153 AY358093:197 AK310202:202 ENST00000616661.5:-350 NM_004753:-350 BC002730:372 AK222593:433 AF061741:434 CU678154:486 KJ897985:487 DQ893006:487 DQ896252:487 DQ426869:492 |
TATA-Box annotation
| Distance to TSS: | 363 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
