Difference between revisions of "TSS:Hg 10399.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SDR1= | |SDR1= | ||
|SDR16C1= | |SDR16C1= | ||
| + | |all_trans=ENST00000616661.5:428 NM_004753:428 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=428 |
| − | |distance_to_tss=- | + | |distance_to_tss=-433 |
|end=12618649 | |end=12618649 | ||
|end_of_center_position=12618644 | |end_of_center_position=12618644 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=DD83.1 | + | |gene_alias=DD83.1{{!}}RDH17{{!}}Rsdr1{{!}}SDR1{{!}}SDR16C1{{!}}retSDR1 |
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
| − | |gene_name=DHRS3 | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|nearest_ensembl=ENSG00000162496 | |nearest_ensembl=ENSG00000162496 | ||
|nearest_promoter_id=NM_004753 | |nearest_promoter_id=NM_004753 | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| − | |num_trans= | + | |num_trans=2 |
|retSDR1= | |retSDR1= | ||
|species=human | |species=human | ||
| Line 26: | Line 32: | ||
|start_of_center_position=12618643 | |start_of_center_position=12618643 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000616661.5 NM_004753 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10399.1 | |tss_id=hg_10399.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=O75911 | ||
}} | }} | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12618643 |
|---|---|
| End of the center position in the TSS region: | 12618644 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000616661.5 NM_004753 |
|---|---|
| Distance: | 428 |
| Num_trans: | 2 |
| All_trans: | ENST00000616661.5:428 NM_004753:428 |
TATA-Box annotation
| Distance to TSS: | -433 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
