Difference between revisions of "TSS:Hg 10412.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC016048:85 ENST00000376085.4:-230 NM_001010847:-230 LP895739:-275 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=85 |
| − | |distance_to_tss= | + | |distance_to_tss=243 |
|end=13513773 | |end=13513773 | ||
|end_of_center_position=13513761 | |end_of_center_position=13513761 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=13513760 | |start_of_center_position=13513760 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC016048 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10412.1 | |tss_id=hg_10412.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13513760 |
|---|---|
| End of the center position in the TSS region: | 13513761 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC016048 |
|---|---|
| Distance: | 85 |
| Num_trans: | 4 |
| All_trans: | BC016048:85 ENST00000376085.4:-230 NM_001010847:-230 LP895739:-275 |
TATA-Box annotation
| Distance to TSS: | 243 |
|---|---|
| Nearest PromoterID: | NM_001010847 |
| Entrez ID: | 126755 |
| Nearest Unigene: | Hs.657356 |
| Nearest Refseq: | NM_001010847 |
| Nearest Ensembl: | ENSG00000162494 |
| Gene Name: | leucine rich repeat containing 38 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
