Difference between revisions of "TSS:Hg 100397.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=67 |entrez_id=4712 |gc_percent=0.626866 |gene_alias=B17|CI |gene_description=NADH:ubiquinone oxidoreductase subunit B6 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CI= | ||
| + | |all_trans=AF035840:-2 BC029247:-3 AK289702:-12 AF067167:-29 BC016708:-30 ENST00000350021.2:-33 uc003zrf.3:-33 BC009801:-33 ENST00000379847.7:-36 uc003zre.3:-36 KJ891678:47 CR456920:48 ENST00000366466.5:-58 NM_002493:-58 NM_001199987:-58 NM_182739:-58 uc022bfg.2:-58 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=-2 | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
| + | |end=32573126 | ||
|entrez_id=4712 | |entrez_id=4712 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=B17|CI | |gene_alias=B17|CI | ||
|gene_description=NADH:ubiquinone oxidoreductase subunit B6 | |gene_description=NADH:ubiquinone oxidoreductase subunit B6 | ||
| − | |gene_name=NDUFB6 | + | |gene_id=4712 |
| + | |gene_name=NADH:ubiquinone oxidoreductase subunit B6 | ||
| + | |gene_source=HGNC:7701 | ||
| + | |gene_symbol=NDUFB6 | ||
| + | |gene_synonyms=B17 CI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7701 | ||
|nearest_ensembl=ENSG00000165264 | |nearest_ensembl=ENSG00000165264 | ||
|nearest_promoter_id=NM_002493 | |nearest_promoter_id=NM_002493 | ||
|nearest_refseq=NM_002493 | |nearest_refseq=NM_002493 | ||
|nearest_unigene=Hs.493668 | |nearest_unigene=Hs.493668 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=32573107 | ||
| + | |strand=- | ||
| + | |transcript_name=AF035840 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100397.1 | |tss_id=hg_100397.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF035840 |
|---|---|
| Distance: | -2 |
| Num_trans: | 17 |
| All_trans: | AF035840:-2 BC029247:-3 AK289702:-12 AF067167:-29 BC016708:-30 ENST00000350021.2:-33 uc003zrf.3:-33 BC009801:-33 ENST00000379847.7:-36 uc003zre.3:-36 KJ891678:47 CR456920:48 ENST00000366466.5:-58 NM_002493:-58 NM_001199987:-58 NM_182739:-58 uc022bfg.2:-58 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NM_002493 |
| Entrez ID: | 4712 |
| Nearest Unigene: | Hs.493668 |
| Nearest Refseq: | NM_002493 |
| Nearest Ensembl: | ENSG00000165264 |
| Gene Name: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Alias: | B17 |
| Gene Description: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
