Difference between revisions of "TSS:Hg 242827.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000265707.10:35 NM_001190956:35 NM_001320313:35 NM_014237:35 NR_135201:35 ENST00000520001.5:-44 AK313961:45 ENST00000379866.5:48 AY358321:48 ENST00000520772.5:52 BC070279:52 BC034624:55 KJ892612:86 KJ892613:88 CU687082:89 ENST00000520087.5:90 AJ133004:90 BC121045:90 BC121046:90 AK225744:98 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=35 |
|distance_to_tss=-40756 | |distance_to_tss=-40756 | ||
|end=768432 | |end=768432 | ||
| Line 11: | Line 11: | ||
|gene_alias=PRKAR1 | |gene_alias=PRKAR1 | ||
|gene_description=protein kinase cAMP-dependent type I regulatory subunit beta | |gene_description=protein kinase cAMP-dependent type I regulatory subunit beta | ||
| − | |gene_id= | + | |gene_id=8749 |
| − | |gene_name= | + | |gene_name=ADAM metallopeptidase domain 18 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:196 |
| − | |gene_symbol= | + | |gene_symbol=ADAM18 |
| − | |gene_synonyms= | + | |gene_synonyms=ADAM27 tMDCIII |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:196 |
|nearest_ensembl=ENSG00000188191 | |nearest_ensembl=ENSG00000188191 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164758 |
|nearest_refseq=NM_002735 | |nearest_refseq=NM_002735 | ||
|nearest_unigene=Hs.520851 | |nearest_unigene=Hs.520851 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=768431 | |start=768431 | ||
|start_of_center_position=39584532 | |start_of_center_position=39584532 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000265707.10 NM_001190956 NM_001320313 NM_014237 NR_135201 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242827.1 | |tss_id=hg_242827.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9Y3Q7 |
}} | }} | ||
Revision as of 16:24, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 39584532 |
|---|---|
| End of the center position in the TSS region: | 39584533 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265707.10 NM_001190956 NM_001320313 NM_014237 NR_135201 |
|---|---|
| Distance: | 35 |
| Num_trans: | 20 |
| All_trans: | ENST00000265707.10:35 NM_001190956:35 NM_001320313:35 NM_014237:35 NR_135201:35 ENST00000520001.5:-44 AK313961:45 ENST00000379866.5:48 AY358321:48 ENST00000520772.5:52 BC070279:52 BC034624:55 KJ892612:86 KJ892613:88 CU687082:89 ENST00000520087.5:90 AJ133004:90 BC121045:90 BC121046:90 AK225744:98 |
TATA-Box annotation
| Distance to TSS: | -40756 |
|---|---|
| Nearest PromoterID: | NM_001164758 |
| Entrez ID: | 5575 |
| Nearest Unigene: | Hs.520851 |
| Nearest Refseq: | NM_002735 |
| Nearest Ensembl: | ENSG00000188191 |
| Gene Name: | ADAM metallopeptidase domain 18 |
| Gene Alias: | PRKAR1 |
| Gene Description: | protein kinase cAMP-dependent type I regulatory subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
