Difference between revisions of "TSS:Hg 88588.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000265707.10:0 NM_001190956:0 NM_001320313:0 NM_014237:0 NR_135201:0 AK313961:5 ENST00000379866.5:8 AY358321:8 ENST00000520772.5:12 BC070279:12 BC034624:15 KJ892612:46 KJ892613:48 CU687082:49 ENST00000520087.5:50 AJ133004:50 BC121045:50 BC121046:50 AK225744:58 ENST00000520001.5:-74 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 9: | Line 9: | ||
|entrez_id=8749 | |entrez_id=8749 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=ADAM27 | + | |gene_alias=ADAM27{{!}}tMDCIII |
|gene_description=ADAM metallopeptidase domain 18 | |gene_description=ADAM metallopeptidase domain 18 | ||
|gene_id=8749 | |gene_id=8749 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:196 | |hgnc_mgi_id=HGNC:196 | ||
|nearest_ensembl=ENSG00000168619 | |nearest_ensembl=ENSG00000168619 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001190956 |
|nearest_refseq=NM_014237 | |nearest_refseq=NM_014237 | ||
|nearest_unigene=Hs.127930 | |nearest_unigene=Hs.127930 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=39584562 | |start=39584562 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tMDCIII= | |tMDCIII= | ||
| − | |transcript_name= | + | |transcript_name=ENST00000265707.10 NM_001190956 NM_001320313 NM_014237 NR_135201 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_88588.1 | |tss_id=hg_88588.1 | ||
Revision as of 17:51, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 39584567 |
|---|---|
| End of the center position in the TSS region: | 39584568 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265707.10 NM_001190956 NM_001320313 NM_014237 NR_135201 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000265707.10:0 NM_001190956:0 NM_001320313:0 NM_014237:0 NR_135201:0 AK313961:5 ENST00000379866.5:8 AY358321:8 ENST00000520772.5:12 BC070279:12 BC034624:15 KJ892612:46 KJ892613:48 CU687082:49 ENST00000520087.5:50 AJ133004:50 BC121045:50 BC121046:50 AK225744:58 ENST00000520001.5:-74 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001190956 |
| Entrez ID: | 8749 |
| Nearest Unigene: | Hs.127930 |
| Nearest Refseq: | NM_014237 |
| Nearest Ensembl: | ENSG00000168619 |
| Gene Name: | ADAM metallopeptidase domain 18 |
| Gene Alias: | ADAM27|tMDCIII |
| Gene Description: | ADAM metallopeptidase domain 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
