Difference between revisions of "TSS:Hg 10482.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ZNF151= | |ZNF151= | ||
|ZNF60= | |ZNF60= | ||
| − | |all_trans=ENST00000471805.5 | + | |all_trans=ENST00000471805.5:-9 ENST00000474511.1:-44 ENST00000487785.1:-54 ENST00000444358.1:-79 ENST00000472658.1:408 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 11: | Line 11: | ||
|entrez_id=7709 | |entrez_id=7709 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=MIZ-1 | + | |gene_alias=MIZ-1{{!}}ZNF151{{!}}ZNF60{{!}}pHZ-67 |
|gene_description=zinc finger and BTB domain containing 17 | |gene_description=zinc finger and BTB domain containing 17 | ||
|gene_id=7709 | |gene_id=7709 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:12936 | |hgnc_mgi_id=HGNC:12936 | ||
|nearest_ensembl=ENSG00000116809 | |nearest_ensembl=ENSG00000116809 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242884 |
|nearest_refseq=NM_003443 | |nearest_refseq=NM_003443 | ||
|nearest_unigene=Hs.433764 | |nearest_unigene=Hs.433764 | ||
| − | |num_trans= | + | |num_trans=5 |
|pHZ-67= | |pHZ-67= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=15944341 | |start_of_center_position=15944341 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000471805.5 | + | |transcript_name=ENST00000471805.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10482.1 | |tss_id=hg_10482.1 | ||
Revision as of 17:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15944341 |
|---|---|
| End of the center position in the TSS region: | 15944342 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000471805.5 |
|---|---|
| Distance: | -9 |
| Num_trans: | 5 |
| All_trans: | ENST00000471805.5:-9 ENST00000474511.1:-44 ENST00000487785.1:-54 ENST00000444358.1:-79 ENST00000472658.1:408 |
TATA-Box annotation
| Distance to TSS: | 31791 |
|---|---|
| Nearest PromoterID: | NM_001242884 |
| Entrez ID: | 7709 |
| Nearest Unigene: | Hs.433764 |
| Nearest Refseq: | NM_003443 |
| Nearest Ensembl: | ENSG00000116809 |
| Gene Name: | zinc finger and BTB domain containing 17 |
| Gene Alias: | MIZ-1|ZNF151|ZNF60|pHZ-67 |
| Gene Description: | zinc finger and BTB domain containing 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
