Difference between revisions of "TSS:Hg 174527.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000601861.5 | + | |all_trans=ENST00000601861.5:0 AK300046:10 AK097121:17 ENST00000597887.5:21 ENST00000599164.6:21 NM_001321827:21 NM_001321826:21 NM_001363609:21 NM_001321828:23 ENST00000449408.6:32 AK298062:32 ENST00000600519.5:42 AK074069:42 ENST00000600871.5:45 AK301159:45 ENST00000599124.1:58 BC053606:58 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-28 |
|end=17527246 | |end=17527246 | ||
|end_of_center_position=17527240 | |end_of_center_position=17527240 | ||
|entrez_id=199786 | |entrez_id=199786 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=BCNP1 | + | |gene_alias=BCNP1{{!}}FAM129C |
| − | |gene_description= | + | |gene_description=niban apoptosis regulator 3 |
|gene_id=199786 | |gene_id=199786 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 3 |
|gene_source=HGNC:24130 | |gene_source=HGNC:24130 | ||
| − | |gene_symbol= | + | |gene_symbol=NIBAN3 |
|gene_synonyms=BCNP1 FLJ39802 | |gene_synonyms=BCNP1 FLJ39802 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173544 | |nearest_refseq=NM_173544 | ||
|nearest_unigene=Hs.434133 | |nearest_unigene=Hs.434133 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=17527232 | |start=17527232 | ||
|start_of_center_position=17527239 | |start_of_center_position=17527239 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000601861.5 | + | |transcript_name=ENST00000601861.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_174527.1 | |tss_id=hg_174527.1 | ||
Revision as of 20:53, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17527239 |
|---|---|
| End of the center position in the TSS region: | 17527240 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000601861.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000601861.5:0 AK300046:10 AK097121:17 ENST00000597887.5:21 ENST00000599164.6:21 NM_001321827:21 NM_001321826:21 NM_001363609:21 NM_001321828:23 ENST00000449408.6:32 AK298062:32 ENST00000600519.5:42 AK074069:42 ENST00000600871.5:45 AK301159:45 ENST00000599124.1:58 BC053606:58 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_001321826 |
| Entrez ID: | 199786 |
| Nearest Unigene: | Hs.434133 |
| Nearest Refseq: | NM_173544 |
| Nearest Ensembl: | ENSG00000167483 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | BCNP1|FAM129C |
| Gene Description: | niban apoptosis regulator 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
