Difference between revisions of "TSS:Hg 10576.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PAD2= | |PAD2= | ||
|PDI2= | |PDI2= | ||
| − | |all_trans=NM_007365:0 AK295783:0 | + | |all_trans=ENST00000375486.9:0 NM_007365:0 AK295783:0 ENST00000375481.1:10 AB023211:10 AB030176:10 BC009701:10 AB587350:74 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=1 | + | |distance_to_tss=-1 |
|end=17119459 | |end=17119459 | ||
|end_of_center_position=17119452 | |end_of_center_position=17119452 | ||
|entrez_id=11240 | |entrez_id=11240 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=PAD-H19 | + | |gene_alias=PAD-H19{{!}}PAD2{{!}}PDI2 |
|gene_description=peptidyl arginine deiminase 2 | |gene_description=peptidyl arginine deiminase 2 | ||
|gene_id=11240 | |gene_id=11240 | ||
| − | |gene_name= | + | |gene_name=peptidyl arginine deiminase 2 |
|gene_source=HGNC:18341 | |gene_source=HGNC:18341 | ||
|gene_symbol=PADI2 | |gene_symbol=PADI2 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007365 | |nearest_refseq=NM_007365 | ||
|nearest_unigene=Hs.33455 | |nearest_unigene=Hs.33455 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=17119444 | |start=17119444 | ||
|start_of_center_position=17119451 | |start_of_center_position=17119451 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_007365 AK295783 | + | |transcript_name=ENST00000375486.9 NM_007365 AK295783 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10576.1 | |tss_id=hg_10576.1 | ||
Revision as of 18:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17119451 |
|---|---|
| End of the center position in the TSS region: | 17119452 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375486.9 NM_007365 AK295783 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000375486.9:0 NM_007365:0 AK295783:0 ENST00000375481.1:10 AB023211:10 AB030176:10 BC009701:10 AB587350:74 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_007365 |
| Entrez ID: | 11240 |
| Nearest Unigene: | Hs.33455 |
| Nearest Refseq: | NM_007365 |
| Nearest Ensembl: | ENSG00000117115 |
| Gene Name: | peptidyl arginine deiminase 2 |
| Gene Alias: | PAD-H19|PAD2|PDI2 |
| Gene Description: | peptidyl arginine deiminase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
