Difference between revisions of "TSS:Hg 10593.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AJ421269:247 AB040903:286 LF357184:-293 MA592761:-293 ENST00000375436.9:294 NM_018715:294 LF357183:-379 MA592760:-379 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=247 |
| − | |distance_to_tss=- | + | |distance_to_tss=-304 |
|end=17439992 | |end=17439992 | ||
|end_of_center_position=17439982 | |end_of_center_position=17439982 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018715 | |nearest_refseq=NM_018715 | ||
|nearest_unigene=Hs.380857 | |nearest_unigene=Hs.380857 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=17439970 | |start=17439970 | ||
|start_of_center_position=17439981 | |start_of_center_position=17439981 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AJ421269 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10593.1 | |tss_id=hg_10593.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17439981 |
|---|---|
| End of the center position in the TSS region: | 17439982 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ421269 |
|---|---|
| Distance: | 247 |
| Num_trans: | 8 |
| All_trans: | AJ421269:247 AB040903:286 LF357184:-293 MA592761:-293 ENST00000375436.9:294 NM_018715:294 LF357183:-379 MA592760:-379 |
TATA-Box annotation
| Distance to TSS: | -304 |
|---|---|
| Nearest PromoterID: | NM_018715 |
| Entrez ID: | 55920 |
| Nearest Unigene: | Hs.380857 |
| Nearest Refseq: | NM_018715 |
| Nearest Ensembl: | ENSG00000179051 |
| Gene Name: | regulator of chromosome condensation 2 |
| Gene Alias: | TD-60 |
| Gene Description: | regulator of chromosome condensation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
