Difference between revisions of "TSS:Hg 100399.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=3 |entrez_id=4712 |gc_percent=0.597015 |gene_alias=B17|CI |gene_description=NADH:ubiquinone oxidoreductase subunit B6 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CI= | ||
| + | |all_trans=ENST00000366466.5:0 NM_002493:0 NM_001199987:0 NM_182739:0 uc022bfg.2:0 ENST00000379847.7:12 uc003zre.3:12 ENST00000350021.2:15 uc003zrf.3:15 BC009801:15 BC016708:18 AF067167:19 AK289702:36 BC029247:45 AF035840:46 KJ891678:113 CR456920:114 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=32573189 | ||
|entrez_id=4712 | |entrez_id=4712 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=B17|CI | |gene_alias=B17|CI | ||
|gene_description=NADH:ubiquinone oxidoreductase subunit B6 | |gene_description=NADH:ubiquinone oxidoreductase subunit B6 | ||
| − | |gene_name=NDUFB6 | + | |gene_id=4712 |
| + | |gene_name=NADH:ubiquinone oxidoreductase subunit B6 | ||
| + | |gene_source=HGNC:7701 | ||
| + | |gene_symbol=NDUFB6 | ||
| + | |gene_synonyms=B17 CI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7701 | ||
|nearest_ensembl=ENSG00000165264 | |nearest_ensembl=ENSG00000165264 | ||
|nearest_promoter_id=NM_002493 | |nearest_promoter_id=NM_002493 | ||
|nearest_refseq=NM_002493 | |nearest_refseq=NM_002493 | ||
|nearest_unigene=Hs.493668 | |nearest_unigene=Hs.493668 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=32573173 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000366466.5 NM_002493 NM_001199987 NM_182739 uc022bfg.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100399.1 | |tss_id=hg_100399.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WZX2 O95139 | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000366466.5 NM_002493 NM_001199987 NM_182739 uc022bfg.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000366466.5:0 NM_002493:0 NM_001199987:0 NM_182739:0 uc022bfg.2:0 ENST00000379847.7:12 uc003zre.3:12 ENST00000350021.2:15 uc003zrf.3:15 BC009801:15 BC016708:18 AF067167:19 AK289702:36 BC029247:45 AF035840:46 KJ891678:113 CR456920:114 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_002493 |
| Entrez ID: | 4712 |
| Nearest Unigene: | Hs.493668 |
| Nearest Refseq: | NM_002493 |
| Nearest Ensembl: | ENSG00000165264 |
| Gene Name: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Alias: | B17 |
| Gene Description: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
