Difference between revisions of "TSS:Hg 10642.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZUBR1= | |ZUBR1= | ||
| − | |all_trans=AF348492:-47 | + | |all_trans=AF348492:-47 BC041137:-55 ENST00000375254.8:-65 NM_020765:-65 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=-47 | |distance=-47 | ||
| − | |distance_to_tss= | + | |distance_to_tss=69 |
|end=19210201 | |end=19210201 | ||
|end_of_center_position=19210198 | |end_of_center_position=19210198 | ||
|entrez_id=23352 | |entrez_id=23352 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=RBAF600 | + | |gene_alias=RBAF600{{!}}ZUBR1{{!}}p600 |
|gene_description=ubiquitin protein ligase E3 component n-recognin 4 | |gene_description=ubiquitin protein ligase E3 component n-recognin 4 | ||
|gene_id=23352 | |gene_id=23352 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_020765 | |nearest_refseq=NM_020765 | ||
|nearest_unigene=Hs.148078 | |nearest_unigene=Hs.148078 | ||
| − | |num_trans= | + | |num_trans=4 |
|p600= | |p600= | ||
|species=human | |species=human | ||
Revision as of 18:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19210197 |
|---|---|
| End of the center position in the TSS region: | 19210198 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF348492 |
|---|---|
| Distance: | -47 |
| Num_trans: | 4 |
| All_trans: | AF348492:-47 BC041137:-55 ENST00000375254.8:-65 NM_020765:-65 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_020765 |
| Entrez ID: | 23352 |
| Nearest Unigene: | Hs.148078 |
| Nearest Refseq: | NM_020765 |
| Nearest Ensembl: | ENSG00000127481 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | RBAF600|ZUBR1|p600 |
| Gene Description: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
