Difference between revisions of "TSS:Mm 1265.1"
From referenceTSS
| Line 10: | Line 10: | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=MBI-83 | |gene_alias=MBI-83 | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, H/ACA box 41 |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=predicted gene, 27390 |
|gene_source=MGI:5530772 | |gene_source=MGI:5530772 | ||
|gene_symbol=Gm27390 | |gene_symbol=Gm27390 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=63178470 | |start_of_center_position=63178470 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-84(GCCTAGAAAGGG,-,0.00) |
|transcript_name=ENSMUST00000184516.1 | |transcript_name=ENSMUST00000184516.1 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 02:27, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 63178470 |
|---|---|
| End of the center position in the TSS region: | 63178471 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000184516.1 |
|---|---|
| Distance: | -478 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000184516.1:-478 |
TATA-Box annotation
| Distance to TSS: | -553 |
|---|---|
| Nearest PromoterID: | NR_028558 |
| Entrez ID: | 100217464 |
| Nearest Unigene: | Mm.484706 |
| Nearest Refseq: | NR_028558 |
| Nearest Ensembl: | ENSMUSG00000064602 |
| Gene Name: | predicted gene, 27390 |
| Gene Alias: | MBI-83 |
| Gene Description: | small nucleolar RNA, H/ACA box 41 |
| Gene Type: | snoRNA |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(GCCTAGAAAGGG,-,0.00) |
