Difference between revisions of "TSS:Hg 106035.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=83 |entrez_id=100144748 |gc_percent=0.711443 |gene_alias=CWS4|KILLIN |gene_description="killin, p53-regulated DNA replication i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KILLIN= | ||
| + | |all_trans=ENST00000610634.1:81 NM_000314:81 NM_001304717:81 NM_001304718:81 uc057ush.1:81 U92436:81 ENST00000371953.7:-239 uc001kfb.4:-239 BC005821:276 U96180:322 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=81 | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
| + | |end=87863357 | ||
|entrez_id=100144748 | |entrez_id=100144748 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=CWS4|KILLIN | |gene_alias=CWS4|KILLIN | ||
|gene_description="killin, p53-regulated DNA replication inhibitor" | |gene_description="killin, p53-regulated DNA replication inhibitor" | ||
| − | |gene_name= | + | |gene_id=5728 |
| + | |gene_name=phosphatase and tensin homolog | ||
| + | |gene_source=HGNC:9588 | ||
| + | |gene_symbol=PTEN | ||
| + | |gene_synonyms=MMAC1 PTEN1 TEP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9588 | ||
|nearest_ensembl=ENSG00000227268 | |nearest_ensembl=ENSG00000227268 | ||
|nearest_promoter_id=NM_001126049 | |nearest_promoter_id=NM_001126049 | ||
|nearest_refseq=NM_001126049 | |nearest_refseq=NM_001126049 | ||
|nearest_unigene=Hs.559820 | |nearest_unigene=Hs.559820 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=87863351 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000610634.1 NM_000314 NM_001304717 NM_001304718 uc057ush.1 U92436 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106035.1 | |tss_id=hg_106035.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WT17 P60484 | ||
}} | }} | ||
Revision as of 22:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000610634.1 NM_000314 NM_001304717 NM_001304718 uc057ush.1 U92436 |
|---|---|
| Distance: | 81 |
| Num_trans: | 10 |
| All_trans: | ENST00000610634.1:81 NM_000314:81 NM_001304717:81 NM_001304718:81 uc057ush.1:81 U92436:81 ENST00000371953.7:-239 uc001kfb.4:-239 BC005821:276 U96180:322 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_001126049 |
| Entrez ID: | 100144748 |
| Nearest Unigene: | Hs.559820 |
| Nearest Refseq: | NM_001126049 |
| Nearest Ensembl: | ENSG00000227268 |
| Gene Name: | phosphatase and tensin homolog |
| Gene Alias: | CWS4 |
| Gene Description: | "killin, p53-regulated DNA replication inhibitor" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
