Difference between revisions of "TSS:Hg 1365.1"
From referenceTSS
| Line 2: | Line 2: | ||
|APT2= | |APT2= | ||
|DJ886K2.4= | |DJ886K2.4= | ||
| − | |all_trans=NM_007260:0 AF098668:0 ENST00000420982.5:18 ENST00000374505.6 | + | |all_trans=ENST00000374514.8:0 NM_007260:0 AF098668:0 HM005316:0 ENST00000420982.5:18 ENST00000374505.6:18 BC017034:22 BC017193:33 ENST00000495365.5:34 ENST00000374503.7:34 ENST00000374502.7:52 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=23791169 | |end=23791169 | ||
|end_of_center_position=23791154 | |end_of_center_position=23791154 | ||
|entrez_id=11313 | |entrez_id=11313 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=APT-2 | + | |gene_alias=APT-2{{!}}APT2{{!}}DJ886K2.4 |
| − | |gene_description=lysophospholipase | + | |gene_description=lysophospholipase 2 |
|gene_id=11313 | |gene_id=11313 | ||
| − | |gene_name=lysophospholipase | + | |gene_name=lysophospholipase 2 |
|gene_source=HGNC:6738 | |gene_source=HGNC:6738 | ||
|gene_symbol=LYPLA2 | |gene_symbol=LYPLA2 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007260 | |nearest_refseq=NM_007260 | ||
|nearest_unigene=Hs.533479 | |nearest_unigene=Hs.533479 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=23791137 | |start=23791137 | ||
|start_of_center_position=23791153 | |start_of_center_position=23791153 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_007260 AF098668 | + | |transcript_name=ENST00000374514.8 NM_007260 AF098668 HM005316 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1365.1 | |tss_id=hg_1365.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=O95372 | + | |uniprot_id=A0A140VJC9 O95372 |
}} | }} | ||
Revision as of 06:15, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23791153 |
|---|---|
| End of the center position in the TSS region: | 23791154 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374514.8 NM_007260 AF098668 HM005316 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000374514.8:0 NM_007260:0 AF098668:0 HM005316:0 ENST00000420982.5:18 ENST00000374505.6:18 BC017034:22 BC017193:33 ENST00000495365.5:34 ENST00000374503.7:34 ENST00000374502.7:52 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_007260 |
| Entrez ID: | 11313 |
| Nearest Unigene: | Hs.533479 |
| Nearest Refseq: | NM_007260 |
| Nearest Ensembl: | ENSG00000011009 |
| Gene Name: | lysophospholipase 2 |
| Gene Alias: | APT-2|APT2|DJ886K2.4 |
| Gene Description: | lysophospholipase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
