Difference between revisions of "TSS:Hg 180647.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CLIPR59= | |CLIPR59= | ||
|RSNL1= | |RSNL1= | ||
| − | |all_trans=ENST00000360535. | + | |all_trans=ENST00000360535.9:0 ENST00000592017.5:0 ENST00000586457.1:0 NM_015526:0 LF207597:0 MA443174:0 AK094738:0 AJ427922:0 AK092354:0 BC013116:1 AK294748:40 ENST00000593074.5:137 AK090732:152 AK289509:169 NM_001199570:173 ENST00000590559.2:-449 KJ893505:450 CU680510:450 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22 |
|end=36032894 | |end=36032894 | ||
|end_of_center_position=36032851 | |end_of_center_position=36032851 | ||
|entrez_id=25999 | |entrez_id=25999 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CLIPR-59 | + | |gene_alias=CLIPR-59{{!}}CLIPR59{{!}}RSNL1 |
|gene_description=CAP-Gly domain containing linker protein 3 | |gene_description=CAP-Gly domain containing linker protein 3 | ||
|gene_id=25999 | |gene_id=25999 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_015526 | |nearest_refseq=NM_015526 | ||
|nearest_unigene=Hs.466539 | |nearest_unigene=Hs.466539 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=36032807 | |start=36032807 | ||
|start_of_center_position=36032850 | |start_of_center_position=36032850 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000360535. | + | |transcript_name=ENST00000360535.9 ENST00000592017.5 ENST00000586457.1 NM_015526 LF207597 MA443174 AK094738 AJ427922 AK092354 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_180647.1 | |tss_id=hg_180647.1 | ||
Revision as of 23:13, 16 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 36032850 |
|---|---|
| End of the center position in the TSS region: | 36032851 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000360535.9 ENST00000592017.5 ENST00000586457.1 NM_015526 LF207597 MA443174 AK094738 AJ427922 AK092354 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000360535.9:0 ENST00000592017.5:0 ENST00000586457.1:0 NM_015526:0 LF207597:0 MA443174:0 AK094738:0 AJ427922:0 AK092354:0 BC013116:1 AK294748:40 ENST00000593074.5:137 AK090732:152 AK289509:169 NM_001199570:173 ENST00000590559.2:-449 KJ893505:450 CU680510:450 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_015526 |
| Entrez ID: | 25999 |
| Nearest Unigene: | Hs.466539 |
| Nearest Refseq: | NM_015526 |
| Nearest Ensembl: | ENSG00000105270 |
| Gene Name: | CAP-Gly domain containing linker protein 3 |
| Gene Alias: | CLIPR-59|CLIPR59|RSNL1 |
| Gene Description: | CAP-Gly domain containing linker protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
