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Difference between revisions of "TSS:Hg 93905.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000517562.2:0 NM_001190972:0 uc022axl.2:0
+
|all_trans=ENST00000517562.3:0 NM_001190972:0 NM_001363275:123
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.16
 
|cpg_percent=0.16
 
|distance=0
 
|distance=0
|distance_to_tss=19
+
|distance_to_tss=0
 
|end=90985276
 
|end=90985276
 
|end_of_center_position=90985238
 
|end_of_center_position=90985238
Line 27: Line 27:
 
|start_of_center_position=90985237
 
|start_of_center_position=90985237
 
|strand=-
 
|strand=-
|transcript_name=ENST00000517562.2 NM_001190972 uc022axl.2
+
|transcript_name=ENST00000517562.3 NM_001190972
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_93905.1
 
|tss_id=hg_93905.1

Revision as of 19:55, 18 June 2021

Basic information about the TSS


TSS ID:hg_93905.1
Species:human
Chr:chr8
TSS Classification:yes
Start:90985199
End:90985276
Strand:-
TSS Score:1
Start of the center position in the TSS region:90985237
End of the center position in the TSS region:90985238



Gene and protein annotation


Transcript_name:ENST00000517562.3 NM_001190972
Distance:0
GeneID:100127983
HGNC/MGI_ID:HGNC:44672
UniProt_ID:P0DMB2
Gene_name:chromosome 8 open reading frame 88
Gene_symbol:C8orf88
Gene_synonyms:
Gene_source:HGNC:44672



Transcript annotation


Transcript_name:ENST00000517562.3 NM_001190972
Distance:0
Num_trans:3
All_trans:ENST00000517562.3:0 NM_001190972:0 NM_001363275:123



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001190972
Entrez ID:100127983
Nearest Unigene:Hs.733266
Nearest Refseq:NM_001190972
Nearest Ensembl:ENSG00000253250
Gene Name:chromosome 8 open reading frame 88
Gene Alias:-
Gene Description:chromosome 8 open reading frame 88
Gene Type:protein-coding
CpG%:0.16
GC%:0.845771
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):