Difference between revisions of "TSS:Hg 106111.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=98 |entrez_id=3433 |gc_percent=0.447761 |gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GARG-39= | ||
| + | |IFI-54= | ||
| + | |IFI-54K= | ||
| + | |IFI54= | ||
| + | |IFIT-2= | ||
| + | |ISG-54 K= | ||
| + | |ISG-54K= | ||
| + | |ISG54= | ||
| + | |P54= | ||
| + | |all_trans=ENST00000611722.1:0 uc057uug.1:0 BC005987:0 BC032839:0 AK300431:0 AK312831:-39 ENST00000371826.3:-84 uc009xts.4:-84 NM_001547:-90 | ||
| + | |chr=chr10 | ||
| + | |cig42= | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=98 | |distance_to_tss=98 | ||
| + | |end=89302055 | ||
|entrez_id=3433 | |entrez_id=3433 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 | |gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 | ||
|gene_description=interferon induced protein with tetratricopeptide repeats 2 | |gene_description=interferon induced protein with tetratricopeptide repeats 2 | ||
| − | |gene_name=IFIT2 | + | |gene_id=3433 |
| + | |gene_name=interferon induced protein with tetratricopeptide repeats 2 | ||
| + | |gene_source=HGNC:5409 | ||
| + | |gene_symbol=IFIT2 | ||
| + | |gene_synonyms=GARG-39 IFI-54 ISG-54K cig42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5409 | ||
|nearest_ensembl=ENSG00000119922 | |nearest_ensembl=ENSG00000119922 | ||
|nearest_promoter_id=NM_001547 | |nearest_promoter_id=NM_001547 | ||
|nearest_refseq=NM_001547 | |nearest_refseq=NM_001547 | ||
|nearest_unigene=Hs.437609 | |nearest_unigene=Hs.437609 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=89302038 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106111.1 | |tss_id=hg_106111.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087X279 B4DTZ5 Q05DN2 Q8IZ03 | ||
}} | }} | ||
Revision as of 22:04, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000611722.1 uc057uug.1 BC005987 BC032839 AK300431 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000611722.1:0 uc057uug.1:0 BC005987:0 BC032839:0 AK300431:0 AK312831:-39 ENST00000371826.3:-84 uc009xts.4:-84 NM_001547:-90 |
TATA-Box annotation
| Distance to TSS: | 98 |
|---|---|
| Nearest PromoterID: | NM_001547 |
| Entrez ID: | 3433 |
| Nearest Unigene: | Hs.437609 |
| Nearest Refseq: | NM_001547 |
| Nearest Ensembl: | ENSG00000119922 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Alias: | G10P2 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
