Difference between revisions of "TSS:Hg 94116.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000524245.5 | + | |all_trans=ENST00000524245.5:116 ENST00000520271.5:-363 ENST00000522940.5:-364 X13238:-403 ENST00000523016.1:-421 ENST00000517682.6:-422 ENST00000297564.6:-425 ENST00000518171.5:-438 ENST00000522934.5:-447 AK311791:-447 ENST00000520517.5:-448 ENST00000520468.7:-448 NM_004374:-448 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=116 | |distance=116 | ||
| − | |distance_to_tss= | + | |distance_to_tss=452 |
|end=99893259 | |end=99893259 | ||
|end_of_center_position=99893255 | |end_of_center_position=99893255 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004374 | |nearest_refseq=NM_004374 | ||
|nearest_unigene=Hs.351875 | |nearest_unigene=Hs.351875 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=99893250 | |start=99893250 | ||
|start_of_center_position=99893254 | |start_of_center_position=99893254 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000524245.5 | + | |transcript_name=ENST00000524245.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_94116.1 | |tss_id=hg_94116.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R9B7 | + | |uniprot_id=A0A024R9B7 |
}} | }} | ||
Revision as of 20:00, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 99893254 |
|---|---|
| End of the center position in the TSS region: | 99893255 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000524245.5 |
|---|---|
| Distance: | 116 |
| Num_trans: | 13 |
| All_trans: | ENST00000524245.5:116 ENST00000520271.5:-363 ENST00000522940.5:-364 X13238:-403 ENST00000523016.1:-421 ENST00000517682.6:-422 ENST00000297564.6:-425 ENST00000518171.5:-438 ENST00000522934.5:-447 AK311791:-447 ENST00000520517.5:-448 ENST00000520468.7:-448 NM_004374:-448 |
TATA-Box annotation
| Distance to TSS: | 452 |
|---|---|
| Nearest PromoterID: | NM_004374 |
| Entrez ID: | 1345 |
| Nearest Unigene: | Hs.351875 |
| Nearest Refseq: | NM_004374 |
| Nearest Ensembl: | ENSG00000164919 |
| Gene Name: | cytochrome c oxidase subunit 6C |
| Gene Alias: | - |
| Gene Description: | cytochrome c oxidase subunit 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
