Difference between revisions of "TSS:Hg 106145.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=0 |entrez_id=439996 |gc_percent=0.447761 |gene_alias=IFIT1L|bA149I23.6 |gene_description=interferon induced protein with tetratrico...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000371809.3:0 NM_001010987:0 uc001kgh.3:0 BX647300:0 BC150189:11 BC137368:23 BC137369:23 | ||
| + | |bA149I23.6= | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
| + | |end=89378063 | ||
|entrez_id=439996 | |entrez_id=439996 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=IFIT1L|bA149I23.6 | |gene_alias=IFIT1L|bA149I23.6 | ||
|gene_description=interferon induced protein with tetratricopeptide repeats 1B | |gene_description=interferon induced protein with tetratricopeptide repeats 1B | ||
| − | |gene_name=IFIT1B | + | |gene_id=439996 |
| + | |gene_name=interferon induced protein with tetratricopeptide repeats 1B | ||
| + | |gene_source=HGNC:23442 | ||
| + | |gene_symbol=IFIT1B | ||
| + | |gene_synonyms=bA149I23.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23442 | ||
|nearest_ensembl=ENSG00000204010 | |nearest_ensembl=ENSG00000204010 | ||
|nearest_promoter_id=NM_001010987 | |nearest_promoter_id=NM_001010987 | ||
|nearest_refseq=NM_001010987 | |nearest_refseq=NM_001010987 | ||
|nearest_unigene=Hs.500491 | |nearest_unigene=Hs.500491 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=89378049 | ||
| + | |strand=+ | ||
|tata_box="-35(CCATATATAAGC,+,0.00),-35(CCATATATAAGC,-,0.00)" | |tata_box="-35(CCATATATAAGC,+,0.00),-35(CCATATATAAGC,-,0.00)" | ||
| + | |transcript_name=ENST00000371809.3 NM_001010987 uc001kgh.3 BX647300 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106145.1 | |tss_id=hg_106145.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T764 | ||
}} | }} | ||
Revision as of 22:06, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371809.3 NM_001010987 uc001kgh.3 BX647300 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000371809.3:0 NM_001010987:0 uc001kgh.3:0 BX647300:0 BC150189:11 BC137368:23 BC137369:23 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001010987 |
| Entrez ID: | 439996 |
| Nearest Unigene: | Hs.500491 |
| Nearest Refseq: | NM_001010987 |
| Nearest Ensembl: | ENSG00000204010 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 1B |
| Gene Alias: | IFIT1L |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 1B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(CCATATATAAGC,+,0.00),-35(CCATATATAAGC,-,0.00)" |
