Difference between revisions of "TSS:Hg 10617.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=34 |entrez_id=8659 |gc_percent=0.477612 |gene_alias=ALDH4|P5CD|P5CDh |gene_description=aldehyde dehydrogenase 4 family member A1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P5CD= | ||
| + | |P5CDh= | ||
| + | |all_trans=ENST00000375341.7:-5 uc001bbc.4:-5 NM_003748:-23 NM_170726:-23 NM_001319218:-23 ENST00000432718.1:31 uc057cvc.1:31 AK289972:31 ENST00000290597.9:202 uc001bbb.4:202 U24266:202 U24267:202 AK222486:202 BC023600:215 BC007581:226 ENST00000538839.5:227 uc021ohl.2:227 FJ462711:227 KR710110:232 KJ897887:232 DQ893505:232 DQ896489:232 AB587364:232 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-5 | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
| + | |end=18902776 | ||
|entrez_id=8659 | |entrez_id=8659 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=ALDH4|P5CD|P5CDh | |gene_alias=ALDH4|P5CD|P5CDh | ||
|gene_description=aldehyde dehydrogenase 4 family member A1 | |gene_description=aldehyde dehydrogenase 4 family member A1 | ||
| − | |gene_name=ALDH4A1 | + | |gene_id=8659 |
| + | |gene_name=aldehyde dehydrogenase 4 family member A1 | ||
| + | |gene_source=HGNC:406 | ||
| + | |gene_symbol=ALDH4A1 | ||
| + | |gene_synonyms=P5CDh | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:406 | ||
|nearest_ensembl=ENSG00000159423 | |nearest_ensembl=ENSG00000159423 | ||
|nearest_promoter_id=NM_170726 | |nearest_promoter_id=NM_170726 | ||
|nearest_refseq=NM_003748 | |nearest_refseq=NM_003748 | ||
|nearest_unigene=Hs.77448 | |nearest_unigene=Hs.77448 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=18902754 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375341.7 uc001bbc.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10617.1 | |tss_id=hg_10617.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024RAD8 P30038 | ||
}} | }} | ||
Revision as of 22:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375341.7 uc001bbc.4 |
|---|---|
| Distance: | -5 |
| Num_trans: | 23 |
| All_trans: | ENST00000375341.7:-5 uc001bbc.4:-5 NM_003748:-23 NM_170726:-23 NM_001319218:-23 ENST00000432718.1:31 uc057cvc.1:31 AK289972:31 ENST00000290597.9:202 uc001bbb.4:202 U24266:202 U24267:202 AK222486:202 BC023600:215 BC007581:226 ENST00000538839.5:227 uc021ohl.2:227 FJ462711:227 KR710110:232 KJ897887:232 DQ893505:232 DQ896489:232 AB587364:232 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_170726 |
| Entrez ID: | 8659 |
| Nearest Unigene: | Hs.77448 |
| Nearest Refseq: | NM_003748 |
| Nearest Ensembl: | ENSG00000159423 |
| Gene Name: | aldehyde dehydrogenase 4 family member A1 |
| Gene Alias: | ALDH4 |
| Gene Description: | aldehyde dehydrogenase 4 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
