Difference between revisions of "TSS:Hg 12627.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000354381.3 | + | |all_trans=ENST00000354381.3:48 AK091941:48 AB284127:-51 BC060866:-51 ENST00000371153.9:-73 NM_181712:-73 NM_001320269:-73 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|dJ1078M7.1= | |dJ1078M7.1= | ||
|distance=48 | |distance=48 | ||
| − | |distance_to_tss= | + | |distance_to_tss=79 |
|end=62319361 | |end=62319361 | ||
|end_of_center_position=62319355 | |end_of_center_position=62319355 | ||
|entrez_id=163782 | |entrez_id=163782 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=ANKRD38 | + | |gene_alias=ANKRD38{{!}}dJ1078M7.1 |
|gene_description=KN motif and ankyrin repeat domains 4 | |gene_description=KN motif and ankyrin repeat domains 4 | ||
|gene_id=163782 | |gene_id=163782 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_181712 | |nearest_refseq=NM_181712 | ||
|nearest_unigene=Hs.283398 | |nearest_unigene=Hs.283398 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=62319348 | |start=62319348 | ||
|start_of_center_position=62319354 | |start_of_center_position=62319354 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000354381.3 | + | |transcript_name=ENST00000354381.3 AK091941 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_12627.1 | |tss_id=hg_12627.1 | ||
Revision as of 02:17, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 62319354 |
|---|---|
| End of the center position in the TSS region: | 62319355 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000354381.3 AK091941 |
|---|---|
| Distance: | 48 |
| Num_trans: | 7 |
| All_trans: | ENST00000354381.3:48 AK091941:48 AB284127:-51 BC060866:-51 ENST00000371153.9:-73 NM_181712:-73 NM_001320269:-73 |
TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_181712 |
| Entrez ID: | 163782 |
| Nearest Unigene: | Hs.283398 |
| Nearest Refseq: | NM_181712 |
| Nearest Ensembl: | ENSG00000132854 |
| Gene Name: | KN motif and ankyrin repeat domains 4 |
| Gene Alias: | ANKRD38|dJ1078M7.1 |
| Gene Description: | KN motif and ankyrin repeat domains 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
