Difference between revisions of "TSS:Hg 106266.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=18 |entrez_id=54536 |gc_percent=0.781095 |gene_alias=EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p |gene_description=exocyst compl...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SEC15= | ||
| + | |SEC15L= | ||
| + | |SEC15L1= | ||
| + | |SEC15L3= | ||
| + | |Sec15p= | ||
| + | |all_trans=ENST00000443748.6:0 uc009xuc.4:0 AK293857:0 ENST00000371543.5:1 uc001kif.5:1 AF220217:1 NM_019053:-7 NM_001319195:-7 NM_001319200:-7 AL832501:28 EF571007:31 ENST00000260762.10:36 uc001kig.4:36 AK315544:36 BC028395:36 CU688490:50 EU832839:50 GQ129240:50 KJ898998:50 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| + | |end=92848484 | ||
|entrez_id=54536 | |entrez_id=54536 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p | |gene_alias=EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p | ||
|gene_description=exocyst complex component 6 | |gene_description=exocyst complex component 6 | ||
| − | |gene_name=EXOC6 | + | |gene_id=54536 |
| + | |gene_name=exocyst complex component 6 | ||
| + | |gene_source=HGNC:23196 | ||
| + | |gene_symbol=EXOC6 | ||
| + | |gene_synonyms=DKFZp761I2124 EXOC6A FLJ1125 MGC33397 SEC15L Sec15p | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23196 | ||
|nearest_ensembl=ENSG00000138190 | |nearest_ensembl=ENSG00000138190 | ||
|nearest_promoter_id=NM_001319195 | |nearest_promoter_id=NM_001319195 | ||
|nearest_refseq=NM_019053 | |nearest_refseq=NM_019053 | ||
|nearest_unigene=Hs.655657 | |nearest_unigene=Hs.655657 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=92848461 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000443748.6 uc009xuc.4 AK293857 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106266.1 | |tss_id=hg_106266.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DEZ1 E7EW84 | ||
}} | }} | ||
Revision as of 22:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000443748.6 uc009xuc.4 AK293857 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000443748.6:0 uc009xuc.4:0 AK293857:0 ENST00000371543.5:1 uc001kif.5:1 AF220217:1 NM_019053:-7 NM_001319195:-7 NM_001319200:-7 AL832501:28 EF571007:31 ENST00000260762.10:36 uc001kig.4:36 AK315544:36 BC028395:36 CU688490:50 EU832839:50 GQ129240:50 KJ898998:50 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001319195 |
| Entrez ID: | 54536 |
| Nearest Unigene: | Hs.655657 |
| Nearest Refseq: | NM_019053 |
| Nearest Ensembl: | ENSG00000138190 |
| Gene Name: | exocyst complex component 6 |
| Gene Alias: | EXOC6A |
| Gene Description: | exocyst complex component 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
