Difference between revisions of "TSS:Hg 237023.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB018329:-10 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance=- | + | |distance=-10 |
|distance_to_tss=-13 | |distance_to_tss=-13 | ||
|end=7583531 | |end=7583531 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100996842 | |gene_description=uncharacterized LOC100996842 | ||
| − | |gene_id= | + | |gene_id=23266 |
| − | |gene_name= | + | |gene_name=adhesion G protein-coupled receptor L2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:18582 |
| − | |gene_symbol= | + | |gene_symbol=ADGRL2 |
| − | |gene_synonyms= | + | |gene_synonyms=KIAA0786 LEC1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:18582 |
|nearest_ensembl=ENSG00000233223 | |nearest_ensembl=ENSG00000233223 | ||
|nearest_promoter_id=NR_136403 | |nearest_promoter_id=NR_136403 | ||
|nearest_refseq=NM_001322800 | |nearest_refseq=NM_001322800 | ||
|nearest_unigene=Hs.720681 | |nearest_unigene=Hs.720681 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=7583530 | |start=7583530 | ||
|start_of_center_position=81950312 | |start_of_center_position=81950312 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB018329 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_237023.1 | |tss_id=hg_237023.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 14:10, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81950312 |
|---|---|
| End of the center position in the TSS region: | 81950313 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB018329 |
|---|---|
| Distance: | -10 |
| Num_trans: | 1 |
| All_trans: | AB018329:-10 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NR_136403 |
| Entrez ID: | 100996842 |
| Nearest Unigene: | Hs.720681 |
| Nearest Refseq: | NM_001322800 |
| Nearest Ensembl: | ENSG00000233223 |
| Gene Name: | adhesion G protein-coupled receptor L2 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100996842 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
