Difference between revisions of "TSS:Hg 242710.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TENS1= | |TENS1= | ||
| + | |all_trans=ENST00000534781.1:-490 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=-490 |
| − | |distance_to_tss= | + | |distance_to_tss=95293 |
|end=47369514 | |end=47369514 | ||
|end_of_center_position=144790372 | |end_of_center_position=144790372 | ||
| − | |entrez_id= | + | |entrez_id=109623468 |
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=small nucleolar RNA, C/D box 151 |
| − | |gene_name= | + | |gene_id=6132 |
| − | |gene_type= | + | |gene_name=ribosomal protein L8 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:10368 |
| − | |nearest_promoter_id= | + | |gene_symbol=RPL8 |
| − | |nearest_refseq= | + | |gene_synonyms=L8 |
| − | |nearest_unigene= | + | |gene_type=snoRNA |
| − | |num_trans= | + | |hgnc_mgi_id=HGNC:10368 |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_145813 | ||
| + | |nearest_refseq=NR_145813 | ||
| + | |nearest_unigene= | ||
| + | |num_trans=1 | ||
|species=human | |species=human | ||
|start=47369506 | |start=47369506 | ||
|start_of_center_position=144790371 | |start_of_center_position=144790371 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000534781.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242710.1 | |tss_id=hg_242710.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 144790371 |
|---|---|
| End of the center position in the TSS region: | 144790372 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000534781.1 |
|---|---|
| Distance: | -490 |
| Num_trans: | 1 |
| All_trans: | ENST00000534781.1:-490 |
TATA-Box annotation
| Distance to TSS: | 95293 |
|---|---|
| Nearest PromoterID: | NR_145813 |
| Entrez ID: | 109623468 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_145813 |
| Nearest Ensembl: | |
| Gene Name: | ribosomal protein L8 |
| Gene Alias: | - |
| Gene Description: | small nucleolar RNA, C/D box 151 |
| Gene Type: | snoRNA |
| CpG%: | 0.045 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
