Difference between revisions of "TSS:Hg 106306.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=-62 |entrez_id=51196 |gc_percent=0.791045 |gene_alias=NPHS3|PLCE|PPLC |gene_description=phospholipase C epsilon 1 |gene_name=PLC...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PLCE= | ||
| + | |PPLC= | ||
| + | |all_trans=ENST00000260766.7:33 NM_016341:33 NM_001288989:33 uc001kjk.4:33 AB040949:33 BC151854:33 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=33 | ||
|distance_to_tss=-62 | |distance_to_tss=-62 | ||
| + | |end=93993956 | ||
|entrez_id=51196 | |entrez_id=51196 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=NPHS3|PLCE|PPLC | |gene_alias=NPHS3|PLCE|PPLC | ||
|gene_description=phospholipase C epsilon 1 | |gene_description=phospholipase C epsilon 1 | ||
| − | |gene_name=PLCE1 | + | |gene_id=51196 |
| + | |gene_name=phospholipase C epsilon 1 | ||
| + | |gene_source=HGNC:17175 | ||
| + | |gene_symbol=PLCE1 | ||
| + | |gene_synonyms=KIAA1516 NPHS3 PLCE | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17175 | ||
|nearest_ensembl=ENSG00000138193 | |nearest_ensembl=ENSG00000138193 | ||
|nearest_promoter_id=NM_016341 | |nearest_promoter_id=NM_016341 | ||
|nearest_refseq=NM_016341 | |nearest_refseq=NM_016341 | ||
|nearest_unigene=Hs.655033 | |nearest_unigene=Hs.655033 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=93993897 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000260766.7 NM_016341 NM_001288989 uc001kjk.4 AB040949 BC151854 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106306.1 | |tss_id=hg_106306.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9P212 | ||
}} | }} | ||
Revision as of 22:13, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000260766.7 NM_016341 NM_001288989 uc001kjk.4 AB040949 BC151854 |
|---|---|
| Distance: | 33 |
| Num_trans: | 6 |
| All_trans: | ENST00000260766.7:33 NM_016341:33 NM_001288989:33 uc001kjk.4:33 AB040949:33 BC151854:33 |
TATA-Box annotation
| Distance to TSS: | -62 |
|---|---|
| Nearest PromoterID: | NM_016341 |
| Entrez ID: | 51196 |
| Nearest Unigene: | Hs.655033 |
| Nearest Refseq: | NM_016341 |
| Nearest Ensembl: | ENSG00000138193 |
| Gene Name: | phospholipase C epsilon 1 |
| Gene Alias: | NPHS3 |
| Gene Description: | phospholipase C epsilon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
