Difference between revisions of "TSS:Hg 177809.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000668392.1:0 ENST00000313957.8:0 ENST00000546949.5:0 ENST00000666048.1:0 ENST00000546956.1:0 ENST00000553254.5:0 NR_036508:0 BC044949:0 AK000879:0 ENST00000547364.1:10 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_036508 | |nearest_refseq=NR_036508 | ||
|nearest_unigene=Hs.655081 | |nearest_unigene=Hs.655081 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=58002861 | |start=58002861 | ||
|start_of_center_position=58002886 | |start_of_center_position=58002886 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000546949.5 | + | |transcript_name=ENST00000668392.1 ENST00000313957.8 ENST00000546949.5 ENST00000666048.1 ENST00000546956.1 ENST00000553254.5 NR_036508 BC044949 AK000879 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_177809.1 | |tss_id=hg_177809.1 | ||
Revision as of 22:08, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58002886 |
|---|---|
| End of the center position in the TSS region: | 58002887 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000668392.1 ENST00000313957.8 ENST00000546949.5 ENST00000666048.1 ENST00000546956.1 ENST00000553254.5 NR_036508 BC044949 AK000879 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000668392.1:0 ENST00000313957.8:0 ENST00000546949.5:0 ENST00000666048.1:0 ENST00000546956.1:0 ENST00000553254.5:0 NR_036508:0 BC044949:0 AK000879:0 ENST00000547364.1:10 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NR_036508 |
| Entrez ID: | 100128398 |
| Nearest Unigene: | Hs.655081 |
| Nearest Refseq: | NR_036508 |
| Nearest Ensembl: | ENSG00000176593 |
| Gene Name: | uncharacterized LOC100128398 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128398 |
| Gene Type: | ncRNA |
| CpG%: | 0.135 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
