Personal tools

Difference between revisions of "TSS:Hg 100017.1"

From referenceTSS

Jump to: navigation, search
Line 9: Line 9:
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.005
 
|cpg_percent=0.005
|distance=
+
|distance=NA
|distance_to_tss=-113950
+
|distance_to_tss=19144
 
|end=14512934
 
|end=14512934
 
|end_of_center_position=14512933
 
|end_of_center_position=14512933
 
|entrez_id=4781
 
|entrez_id=4781
 
|gc_percent=0.253731
 
|gc_percent=0.253731
|gene_alias=CTF
+
|gene_alias=CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
 
|gene_description=nuclear factor I B
 
|gene_description=nuclear factor I B
 
|gene_name=NFIB
 
|gene_name=NFIB
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|nearest_ensembl=ENSG00000147862
 
|nearest_ensembl=ENSG00000147862
|nearest_promoter_id=NM_001190738
+
|nearest_promoter_id=NM_001369458
 
|nearest_refseq=NM_005596
 
|nearest_refseq=NM_005596
 
|nearest_unigene=Hs.644095
 
|nearest_unigene=Hs.644095
Line 28: Line 28:
 
|start_of_center_position=14512932
 
|start_of_center_position=14512932
 
|strand=-
 
|strand=-
|tata_box="-49(TTCTTTTAAAAG,-,0.00)"
+
|tata_box=-49(TTCTTTTAAAAG,-,0.00)
 
|transcript_name=
 
|transcript_name=
 
|tss_classification=no
 
|tss_classification=no

Revision as of 17:27, 11 June 2021

Basic information about the TSS


TSS ID:hg_100017.1
Species:human
Chr:chr9
TSS Classification:no
Start:14512931
End:14512934
Strand:-
TSS Score:1
Start of the center position in the TSS region:14512932
End of the center position in the TSS region:14512933



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:NFIB
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:19144
Nearest PromoterID:NM_001369458
Entrez ID:4781
Nearest Unigene:Hs.644095
Nearest Refseq:NM_005596
Nearest Ensembl:ENSG00000147862
Gene Name:NFIB
Gene Alias:CTF
Gene Description:nuclear factor I B
Gene Type:protein-coding
CpG%:0.005
GC%:0.253731
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-49(TTCTTTTAAAAG,-,0.00)