Difference between revisions of "TSS:Hg 106335.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=62971 |entrez_id=3070 |gc_percent=0.39801 |gene_alias=ICF4|LSH|Nbla10143|PASG|SMARCA6 |gene_description="helicase, lymphoid-spec...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LSH= | ||
| + | |Nbla10143= | ||
| + | |PASG= | ||
| + | |SMARCA6= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=62971 | |distance_to_tss=62971 | ||
| + | |end=94608762 | ||
|entrez_id=3070 | |entrez_id=3070 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_018063 | |nearest_refseq=NM_018063 | ||
|nearest_unigene=Hs.463677 | |nearest_unigene=Hs.463677 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=94608713 | ||
| + | |strand=+ | ||
|tata_box="87(TTTTTTAAAGCC,+,0.00)" | |tata_box="87(TTTTTTAAAGCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106335.1 | |tss_id=hg_106335.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 62971 |
|---|---|
| Nearest PromoterID: | NM_001289068 |
| Entrez ID: | 3070 |
| Nearest Unigene: | Hs.463677 |
| Nearest Refseq: | NM_018063 |
| Nearest Ensembl: | ENSG00000119969 |
| Gene Name: | HELLS |
| Gene Alias: | ICF4 |
| Gene Description: | "helicase, lymphoid-specific" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "87(TTTTTTAAAGCC,+,0.00)" |
