Difference between revisions of "TSS:Hg 243220.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC143889:7 BC069622:-20 ENST00000341998.6:-32 ENST00000286344.3:-32 AF097366:-32 AF177987:-32 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=7 |
| − | |distance_to_tss= | + | |distance_to_tss=346509 |
|end=62595366 | |end=62595366 | ||
|end_of_center_position=19786896 | |end_of_center_position=19786896 | ||
| Line 9: | Line 10: | ||
|gc_percent=0.333333 | |gc_percent=0.333333 | ||
|gene_alias=FAM77D | |gene_alias=FAM77D | ||
| − | |gene_description= | + | |gene_description=sodium/potassium transporting ATPase interacting 3 |
| − | |gene_name= | + | |gene_id=25769 |
| + | |gene_name=solute carrier family 24 member 2 | ||
| + | |gene_source=HGNC:10976 | ||
| + | |gene_symbol=SLC24A2 | ||
| + | |gene_synonyms=NCKX2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10976 | ||
|nearest_ensembl=ENSG00000185942 | |nearest_ensembl=ENSG00000185942 | ||
|nearest_promoter_id=NM_001304533 | |nearest_promoter_id=NM_001304533 | ||
|nearest_refseq=NM_173688 | |nearest_refseq=NM_173688 | ||
|nearest_unigene=Hs.654662 | |nearest_unigene=Hs.654662 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=62595360 | |start=62595360 | ||
|start_of_center_position=19786895 | |start_of_center_position=19786895 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC143889 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243220.1 | |tss_id=hg_243220.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:33, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19786895 |
|---|---|
| End of the center position in the TSS region: | 19786896 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC143889 |
|---|---|
| Distance: | 7 |
| Num_trans: | 6 |
| All_trans: | BC143889:7 BC069622:-20 ENST00000341998.6:-32 ENST00000286344.3:-32 AF097366:-32 AF177987:-32 |
TATA-Box annotation
| Distance to TSS: | 346509 |
|---|---|
| Nearest PromoterID: | NM_001304533 |
| Entrez ID: | 286183 |
| Nearest Unigene: | Hs.654662 |
| Nearest Refseq: | NM_173688 |
| Nearest Ensembl: | ENSG00000185942 |
| Gene Name: | solute carrier family 24 member 2 |
| Gene Alias: | FAM77D |
| Gene Description: | sodium/potassium transporting ATPase interacting 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.333333 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
