Difference between revisions of "TSS:Hg 100209.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LEIF2H= | |LEIF2H= | ||
| − | |all_trans=ENST00000380222. | + | |all_trans=ENST00000380222.4:0 NM_002172:0 V00542:12 LP896543:24 BC074956:24 BC104159:26 BC104160:26 KJ891434:68 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=21240007 | |end=21240007 | ||
|end_of_center_position=21240005 | |end_of_center_position=21240005 | ||
|entrez_id=3448 | |entrez_id=3448 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=IFN-alphaH | + | |gene_alias=IFN-alphaH|LEIF2H |
|gene_description=interferon alpha 14 | |gene_description=interferon alpha 14 | ||
|gene_id=3448 | |gene_id=3448 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=21240004 | |start_of_center_position=21240004 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380222 | + | |transcript_name=ENST00000380222.4 NM_002172 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100209.1 | |tss_id=hg_100209.1 | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21240004 |
|---|---|
| End of the center position in the TSS region: | 21240005 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000380222.4 NM_002172 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000380222.4:0 NM_002172:0 V00542:12 LP896543:24 BC074956:24 BC104159:26 BC104160:26 KJ891434:68 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_002172 |
| Entrez ID: | 3448 |
| Nearest Unigene: | Hs.93907 |
| Nearest Refseq: | NM_002172 |
| Nearest Ensembl: | ENSG00000228083 |
| Gene Name: | interferon alpha 14 |
| Gene Alias: | IFN-alphaH |
| Gene Description: | interferon alpha 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
