Difference between revisions of "TSS:Hg 100210.1"
From referenceTSS
| Line 10: | Line 10: | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=IFNAP22 | |gene_alias=IFNAP22 | ||
| − | |gene_description= | + | |gene_description=interferon alpha 22, pseudogene |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=interferon alpha 22, pseudogene |
|gene_source=HGNC:5431 | |gene_source=HGNC:5431 | ||
|gene_symbol=IFNA22P | |gene_symbol=IFNA22P | ||
| Line 27: | Line 27: | ||
|start_of_center_position=21278676 | |start_of_center_position=21278676 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-45(CCCTATTTAAGG,-,0.00) |
|transcript_name=ENST00000458710.2 | |transcript_name=ENST00000458710.2 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21278676 |
|---|---|
| End of the center position in the TSS region: | 21278677 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000458710.2 |
|---|---|
| Distance: | 45 |
| Num_trans: | 3 |
| All_trans: | ENST00000458710.2:45 NR_036676:101 V00539:101 |
TATA-Box annotation
| Distance to TSS: | -113 |
|---|---|
| Nearest PromoterID: | NR_036676 |
| Entrez ID: | 3453 |
| Nearest Unigene: | Hs.545842 |
| Nearest Refseq: | NR_036676 |
| Nearest Ensembl: | |
| Gene Name: | interferon alpha 22, pseudogene |
| Gene Alias: | IFNAP22 |
| Gene Description: | interferon alpha 22, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -45(CCCTATTTAAGG,-,0.00) |
