Difference between revisions of "TSS:Hg 96312.1"
From referenceTSS
| Line 4: | Line 4: | ||
|P15= | |P15= | ||
|TP15= | |TP15= | ||
| − | |all_trans=ENST00000422420. | + | |all_trans=ENST00000422420.2:50 BC038540:62 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=50 |
|distance_to_tss=-104300 | |distance_to_tss=-104300 | ||
|end=22113616 | |end=22113616 | ||
| Line 13: | Line 13: | ||
|entrez_id=1030 | |entrez_id=1030 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=CDK4I | + | |gene_alias=CDK4I{{!}}INK4B{{!}}MTS2{{!}}P15{{!}}TP15{{!}}p15INK4b |
|gene_description=cyclin dependent kinase inhibitor 2B | |gene_description=cyclin dependent kinase inhibitor 2B | ||
|gene_id=100048912 | |gene_id=100048912 | ||
| Line 19: | Line 19: | ||
|gene_source=HGNC:34341 | |gene_source=HGNC:34341 | ||
|gene_symbol=CDKN2B-AS1 | |gene_symbol=CDKN2B-AS1 | ||
| − | |gene_synonyms=ANRIL CDKN2B-AS | + | |gene_synonyms=ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:34341 | |hgnc_mgi_id=HGNC:34341 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004936 | |nearest_refseq=NM_004936 | ||
|nearest_unigene=Hs.72901 | |nearest_unigene=Hs.72901 | ||
| − | |num_trans= | + | |num_trans=2 |
|p15INK4b= | |p15INK4b= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=22113612 | |start_of_center_position=22113612 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000422420. | + | |transcript_name=ENST00000422420.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_96312.1 | |tss_id=hg_96312.1 | ||
Revision as of 20:51, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22113612 |
|---|---|
| End of the center position in the TSS region: | 22113613 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000422420.2 |
|---|---|
| Distance: | 50 |
| Num_trans: | 2 |
| All_trans: | ENST00000422420.2:50 BC038540:62 |
TATA-Box annotation
| Distance to TSS: | -104300 |
|---|---|
| Nearest PromoterID: | NM_078487 |
| Entrez ID: | 1030 |
| Nearest Unigene: | Hs.72901 |
| Nearest Refseq: | NM_004936 |
| Nearest Ensembl: | ENSG00000147883 |
| Gene Name: | CDKN2B antisense RNA 1 |
| Gene Alias: | CDK4I|INK4B|MTS2|P15|TP15|p15INK4b |
| Gene Description: | cyclin dependent kinase inhibitor 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
