Difference between revisions of "TSS:Hg 100293.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HELN1= | |HELN1= | ||
|HUB= | |HUB= | ||
| − | |all_trans=BC035004:0 | + | |all_trans=NM_001171195:0 NM_001351470:0 NM_001351475:0 NM_001385693:0 NM_001385698:0 NM_001385699:0 NM_001385700:0 NM_001385701:0 BC035004:0 BC042393:-16 ENST00000544538.5:-19 ENST00000223951.10:331 BC030692:331 LQ520546:331 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=23821829 | |end=23821829 | ||
|end_of_center_position=23821820 | |end_of_center_position=23821820 | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=HEL-N1 | + | |gene_alias=HEL-N1|HELN1|HUB |
|gene_description=ELAV like RNA binding protein 2 | |gene_description=ELAV like RNA binding protein 2 | ||
|gene_id=1993 | |gene_id=1993 | ||
| − | |gene_name=ELAV like | + | |gene_name=ELAV like RNA binding protein 2 |
|gene_source=HGNC:3313 | |gene_source=HGNC:3313 | ||
|gene_symbol=ELAVL2 | |gene_symbol=ELAVL2 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_004432 | |nearest_refseq=NM_004432 | ||
|nearest_unigene=Hs.166109 | |nearest_unigene=Hs.166109 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=23821810 | |start=23821810 | ||
|start_of_center_position=23821819 | |start_of_center_position=23821819 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC035004 | + | |transcript_name=NM_001171195 NM_001351470 NM_001351475 NM_001385693 NM_001385698 NM_001385699 NM_001385700 NM_001385701 BC035004 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100293.1 | |tss_id=hg_100293.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q12926 |
}} | }} | ||
Revision as of 14:22, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23821819 |
|---|---|
| End of the center position in the TSS region: | 23821820 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001171195 NM_001351470 NM_001351475 NM_001385693 NM_001385698 NM_001385699 NM_001385700 NM_001385701 BC035004 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | NM_001171195:0 NM_001351470:0 NM_001351475:0 NM_001385693:0 NM_001385698:0 NM_001385699:0 NM_001385700:0 NM_001385701:0 BC035004:0 BC042393:-16 ENST00000544538.5:-19 ENST00000223951.10:331 BC030692:331 LQ520546:331 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001171195 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAV like RNA binding protein 2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
