Difference between revisions of "TSS:Hg 100314.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CAAP= | |CAAP= | ||
| − | |all_trans=AK301673:0 ENST00000625311.1 | + | |all_trans=AK301673:0 ENST00000625311.1:-70 AK300739:-70 ENST00000495958.5:-232 HQ447530:-344 AB590748:-344 CU687198:-344 BC071953:-355 ENST00000483493.6:-415 ENST00000650615.1:-420 ENST00000333916.8:-430 NM_024828:-430 AK023719:-430 ENST00000520187.1:-431 BC014658:-432 NM_001167575:-456 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=444 |
|end=26892372 | |end=26892372 | ||
|end_of_center_position=26892359 | |end_of_center_position=26892359 | ||
|entrez_id=79886 | |entrez_id=79886 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=C9orf82 | + | |gene_alias=C9orf82|CAAP |
|gene_description=caspase activity and apoptosis inhibitor 1 | |gene_description=caspase activity and apoptosis inhibitor 1 | ||
|gene_id=79886 | |gene_id=79886 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:25834 | |hgnc_mgi_id=HGNC:25834 | ||
|nearest_ensembl=ENSG00000120159 | |nearest_ensembl=ENSG00000120159 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_024828 |
|nearest_refseq=NM_024828 | |nearest_refseq=NM_024828 | ||
|nearest_unigene=Hs.178357 | |nearest_unigene=Hs.178357 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=26892344 | |start=26892344 | ||
Revision as of 14:22, 14 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 26892358 |
|---|---|
| End of the center position in the TSS region: | 26892359 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK301673 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | AK301673:0 ENST00000625311.1:-70 AK300739:-70 ENST00000495958.5:-232 HQ447530:-344 AB590748:-344 CU687198:-344 BC071953:-355 ENST00000483493.6:-415 ENST00000650615.1:-420 ENST00000333916.8:-430 NM_024828:-430 AK023719:-430 ENST00000520187.1:-431 BC014658:-432 NM_001167575:-456 |
TATA-Box annotation
| Distance to TSS: | 444 |
|---|---|
| Nearest PromoterID: | NM_024828 |
| Entrez ID: | 79886 |
| Nearest Unigene: | Hs.178357 |
| Nearest Refseq: | NM_024828 |
| Nearest Ensembl: | ENSG00000120159 |
| Gene Name: | caspase activity and apoptosis inhibitor 1 |
| Gene Alias: | C9orf82 |
| Gene Description: | caspase activity and apoptosis inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
