Difference between revisions of "TSS:Hg 100411.1"
From referenceTSS
| Line 7: | Line 7: | ||
|HSPF4= | |HSPF4= | ||
|NEDD7= | |NEDD7= | ||
| − | |all_trans=AK001732:-427 | + | |all_trans=LF354217:33 MA589794:33 AK001732:-427 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=33 |
| − | |distance_to_tss= | + | |distance_to_tss=21309 |
|end=33046584 | |end=33046584 | ||
|end_of_center_position=33046583 | |end_of_center_position=33046583 | ||
|entrez_id=3301 | |entrez_id=3301 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=DJ-2 | + | |gene_alias=DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 |
|gene_description=DnaJ heat shock protein family (Hsp40) member A1 | |gene_description=DnaJ heat shock protein family (Hsp40) member A1 | ||
|gene_id=55234 | |gene_id=55234 | ||
| − | |gene_name= | + | |gene_name=DNAJA1 |
|gene_source=HGNC:18247 | |gene_source=HGNC:18247 | ||
|gene_symbol=SMU1 | |gene_symbol=SMU1 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_001539 | |nearest_refseq=NM_001539 | ||
|nearest_unigene=Hs.445203 | |nearest_unigene=Hs.445203 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=33046580 | |start=33046580 | ||
|start_of_center_position=33046582 | |start_of_center_position=33046582 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF354217 MA589794 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100411.1 | |tss_id=hg_100411.1 | ||
Revision as of 15:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33046582 |
|---|---|
| End of the center position in the TSS region: | 33046583 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354217 MA589794 |
|---|---|
| Distance: | 33 |
| Num_trans: | 3 |
| All_trans: | LF354217:33 MA589794:33 AK001732:-427 |
TATA-Box annotation
| Distance to TSS: | 21309 |
|---|---|
| Nearest PromoterID: | NM_001539 |
| Entrez ID: | 3301 |
| Nearest Unigene: | Hs.445203 |
| Nearest Refseq: | NM_001539 |
| Nearest Ensembl: | ENSG00000086061 |
| Gene Name: | DNAJA1 |
| Gene Alias: | DJ-2 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
