Difference between revisions of "TSS:Hg 100472.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GIL= | |GIL= | ||
| − | |all_trans= | + | |all_trans=ENST00000493581.1:173 ENST00000643650.1:173 AK095363:173 ENST00000297991.6:176 NM_001318144:176 NM_004925:176 AK292208:176 AK315760:176 AK303206:176 ENST00000463983.5:187 AB001325:196 BC013566:202 ENST00000645858.1:216 AJ493597:216 KJ890695:238 CR541991:239 BT007199:239 CR542025:239 ENST00000473153.1:260 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=173 |
| − | |distance_to_tss=- | + | |distance_to_tss=-188 |
|end=33447793 | |end=33447793 | ||
|end_of_center_position=33447781 | |end_of_center_position=33447781 | ||
|entrez_id=360 | |entrez_id=360 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=AQP-3 | + | |gene_alias=AQP-3|GIL |
|gene_description=aquaporin 3 (Gill blood group) | |gene_description=aquaporin 3 (Gill blood group) | ||
|gene_id=360 | |gene_id=360 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004925 | |nearest_refseq=NM_004925 | ||
|nearest_unigene=Hs.234642 | |nearest_unigene=Hs.234642 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=33447768 | |start=33447768 | ||
|start_of_center_position=33447780 | |start_of_center_position=33447780 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000493581.1 ENST00000643650.1 AK095363 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100472.1 | |tss_id=hg_100472.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8YD22 |
}} | }} | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33447780 |
|---|---|
| End of the center position in the TSS region: | 33447781 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000493581.1 ENST00000643650.1 AK095363 |
|---|---|
| Distance: | 173 |
| Num_trans: | 19 |
| All_trans: | ENST00000493581.1:173 ENST00000643650.1:173 AK095363:173 ENST00000297991.6:176 NM_001318144:176 NM_004925:176 AK292208:176 AK315760:176 AK303206:176 ENST00000463983.5:187 AB001325:196 BC013566:202 ENST00000645858.1:216 AJ493597:216 KJ890695:238 CR541991:239 BT007199:239 CR542025:239 ENST00000473153.1:260 |
TATA-Box annotation
| Distance to TSS: | -188 |
|---|---|
| Nearest PromoterID: | NM_001318144 |
| Entrez ID: | 360 |
| Nearest Unigene: | Hs.234642 |
| Nearest Refseq: | NM_004925 |
| Nearest Ensembl: | ENSG00000165272 |
| Gene Name: | aquaporin 3 (Gill blood group) |
| Gene Alias: | AQP-3 |
| Gene Description: | aquaporin 3 (Gill blood group) |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
