Difference between revisions of "TSS:Hg 100545.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SLC= | |SLC= | ||
|TCA4= | |TCA4= | ||
| − | |all_trans=AF001979:-178 CR450326:-178 DQ892048:-179 KJ892111:-179 DQ895242:-179 AB463486:-179 ENST00000378792 | + | |all_trans=AF001979:-178 CR450326:-178 DQ892048:-179 KJ892111:-179 DQ895242:-179 AB463486:-179 ENST00000378792.1:-181 U88320:-183 AY358887:-183 BC027918:-185 AB002409:-236 ENST00000259607.7:-248 NM_002989:-248 AK311901:-248 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-178 | |distance=-178 | ||
| − | |distance_to_tss= | + | |distance_to_tss=253 |
|end=34709888 | |end=34709888 | ||
|end_of_center_position=34709883 | |end_of_center_position=34709883 | ||
|entrez_id=6366 | |entrez_id=6366 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=6Ckine | + | |gene_alias=6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 |
|gene_description=C-C motif chemokine ligand 21 | |gene_description=C-C motif chemokine ligand 21 | ||
|gene_id=6366 | |gene_id=6366 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_002989 | |nearest_refseq=NM_002989 | ||
|nearest_unigene=Hs.57907 | |nearest_unigene=Hs.57907 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=34709877 | |start=34709877 | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 34709882 |
|---|---|
| End of the center position in the TSS region: | 34709883 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF001979 CR450326 |
|---|---|
| Distance: | -178 |
| Num_trans: | 14 |
| All_trans: | AF001979:-178 CR450326:-178 DQ892048:-179 KJ892111:-179 DQ895242:-179 AB463486:-179 ENST00000378792.1:-181 U88320:-183 AY358887:-183 BC027918:-185 AB002409:-236 ENST00000259607.7:-248 NM_002989:-248 AK311901:-248 |
TATA-Box annotation
| Distance to TSS: | 253 |
|---|---|
| Nearest PromoterID: | NM_002989 |
| Entrez ID: | 6366 |
| Nearest Unigene: | Hs.57907 |
| Nearest Refseq: | NM_002989 |
| Nearest Ensembl: | ENSG00000137077 |
| Gene Name: | C-C motif chemokine ligand 21 |
| Gene Alias: | 6Ckine |
| Gene Description: | C-C motif chemokine ligand 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
