Difference between revisions of "TSS:Hg 13968.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UNR= | |UNR= | ||
| − | |all_trans= | + | |all_trans=ENST00000525132.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 AK290146:-13 ENST00000339438.10:-14 BX648780:-14 ENST00000358528.9:-15 NM_001007553:-15 NM_007158:-15 NM_001242892:-15 NM_001242893:-15 NM_001130523:-15 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 ENST00000369530.5:-34 ENST00000530886.5:-58 ENST00000610726.4:-81 NM_001242891:-81 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=114757969 | |end=114757969 | ||
|end_of_center_position=114757964 | |end_of_center_position=114757964 | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E{{!}}UNR |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
|gene_id=7812 | |gene_id=7812 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29905 | |hgnc_mgi_id=HGNC:29905 | ||
|nearest_ensembl=ENSG00000009307 | |nearest_ensembl=ENSG00000009307 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001007553 |
|nearest_refseq=NM_007158 | |nearest_refseq=NM_007158 | ||
|nearest_unigene=Hs.69855 | |nearest_unigene=Hs.69855 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=human | |species=human | ||
|start=114757958 | |start=114757958 | ||
|start_of_center_position=114757963 | |start_of_center_position=114757963 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000525132.1 AB020692 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_13968.1 | |tss_id=hg_13968.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E9PJK7 |
}} | }} | ||
Revision as of 07:29, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114757963 |
|---|---|
| End of the center position in the TSS region: | 114757964 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000525132.1 AB020692 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000525132.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 AK290146:-13 ENST00000339438.10:-14 BX648780:-14 ENST00000358528.9:-15 NM_001007553:-15 NM_007158:-15 NM_001242892:-15 NM_001242893:-15 NM_001130523:-15 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 ENST00000369530.5:-34 ENST00000530886.5:-58 ENST00000610726.4:-81 NM_001242891:-81 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001007553 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | cold shock domain containing E1 |
| Gene Alias: | D1S155E|UNR |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
