Difference between revisions of "TSS:Hg 100564.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|XRCC9= | |XRCC9= | ||
| − | |all_trans=ENST00000448890.1:0 | + | |all_trans=ENST00000378643.8:0 ENST00000448890.1:0 NM_004629:0 AK312987:0 AK293427:14 AJ007669:-67 KU159422:-98 BC011623:126 ENST00000425676.5:222 AK311348:222 ENST00000462124.1:246 BC000032:253 U70310:257 DQ892166:386 DQ895360:386 AB464437:389 KJ891145:390 KR709811:390 KR709812:390 KR709813:390 CU674000:390 BT009813:391 KU178053:391 KU178054:391 KU178055:391 KU178056:391 KU178057:391 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 10: | Line 10: | ||
|entrez_id=2189 | |entrez_id=2189 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=FAG | + | |gene_alias=FAG|XRCC9 |
| − | |gene_description= | + | |gene_description=FA complementation group G |
|gene_id=2189 | |gene_id=2189 | ||
| − | |gene_name= | + | |gene_name=FA complementation group G |
|gene_source=HGNC:3588 | |gene_source=HGNC:3588 | ||
|gene_symbol=FANCG | |gene_symbol=FANCG | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004629 | |nearest_refseq=NM_004629 | ||
|nearest_unigene=Hs.591084 | |nearest_unigene=Hs.591084 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=human | |species=human | ||
|start=35079914 | |start=35079914 | ||
|start_of_center_position=35079931 | |start_of_center_position=35079931 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000448890.1 | + | |transcript_name=ENST00000378643.8 ENST00000448890.1 NM_004629 AK312987 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100564.1 | |tss_id=hg_100564.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=C9JSE3 | + | |uniprot_id=C9JSE3 Q53XM5 |
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35079931 |
|---|---|
| End of the center position in the TSS region: | 35079932 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000378643.8 ENST00000448890.1 NM_004629 AK312987 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000378643.8:0 ENST00000448890.1:0 NM_004629:0 AK312987:0 AK293427:14 AJ007669:-67 KU159422:-98 BC011623:126 ENST00000425676.5:222 AK311348:222 ENST00000462124.1:246 BC000032:253 U70310:257 DQ892166:386 DQ895360:386 AB464437:389 KJ891145:390 KR709811:390 KR709812:390 KR709813:390 CU674000:390 BT009813:391 KU178053:391 KU178054:391 KU178055:391 KU178056:391 KU178057:391 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_004629 |
| Entrez ID: | 2189 |
| Nearest Unigene: | Hs.591084 |
| Nearest Refseq: | NM_004629 |
| Nearest Ensembl: | ENSG00000221829 |
| Gene Name: | FA complementation group G |
| Gene Alias: | FAG |
| Gene Description: | FA complementation group G |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
