Difference between revisions of "TSS:Hg 100589.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LYB2= | |LYB2= | ||
| − | |all_trans=ENST00000259633. | + | |all_trans=ENST00000259633.9:38 ENST00000490239.5:38 NM_001782:38 AF283777:38 M54992:40 AK310685:51 AK310093:57 ENST00000378430.3:62 AK307305:62 ENST00000482121.1:75 AK309268:78 ENST00000378431.5:81 BC030227:83 ENST00000477364.5:96 ENST00000463720.5:98 BC011734:102 KJ890871:147 CU688854:147 AB209587:-297 ENST00000612238.4:-352 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=38 |
| − | |distance_to_tss=- | + | |distance_to_tss=-42 |
|end=35618459 | |end=35618459 | ||
|end_of_center_position=35618455 | |end_of_center_position=35618455 | ||
|entrez_id=971 | |entrez_id=971 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=CD72b | + | |gene_alias=CD72b|LYB2 |
|gene_description=CD72 molecule | |gene_description=CD72 molecule | ||
|gene_id=971 | |gene_id=971 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001782 | |nearest_refseq=NM_001782 | ||
|nearest_unigene=Hs.116481 | |nearest_unigene=Hs.116481 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=35618450 | |start=35618450 | ||
|start_of_center_position=35618454 | |start_of_center_position=35618454 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000259633. | + | |transcript_name=ENST00000259633.9 ENST00000490239.5 NM_001782 AF283777 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100589.1 | |tss_id=hg_100589.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35618454 |
|---|---|
| End of the center position in the TSS region: | 35618455 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259633.9 ENST00000490239.5 NM_001782 AF283777 |
|---|---|
| Distance: | 38 |
| Num_trans: | 20 |
| All_trans: | ENST00000259633.9:38 ENST00000490239.5:38 NM_001782:38 AF283777:38 M54992:40 AK310685:51 AK310093:57 ENST00000378430.3:62 AK307305:62 ENST00000482121.1:75 AK309268:78 ENST00000378431.5:81 BC030227:83 ENST00000477364.5:96 ENST00000463720.5:98 BC011734:102 KJ890871:147 CU688854:147 AB209587:-297 ENST00000612238.4:-352 |
TATA-Box annotation
| Distance to TSS: | -42 |
|---|---|
| Nearest PromoterID: | NM_001782 |
| Entrez ID: | 971 |
| Nearest Unigene: | Hs.116481 |
| Nearest Refseq: | NM_001782 |
| Nearest Ensembl: | ENSG00000137101 |
| Gene Name: | CD72 molecule |
| Gene Alias: | CD72b |
| Gene Description: | CD72 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
