Difference between revisions of "TSS:Hg 4819.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000295598.10:30 NM_000701:30 BC003077:46 BC050359:48 ENST00000488733.1:55 D00099:75 X04297:75 AK314777:114 AK308418:194 LF352804:223 MA588381:223 EU176649:293 DQ891882:293 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=30 |
| − | |distance_to_tss= | + | |distance_to_tss=-39 |
|end=116373214 | |end=116373214 | ||
|end_of_center_position=116373206 | |end_of_center_position=116373206 | ||
|entrez_id=476 | |entrez_id=476 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias= | + | |gene_alias=CMT2DD{{!}}HOMGSMR2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 1 | |gene_description=ATPase Na+/K+ transporting subunit alpha 1 | ||
|gene_id=476 | |gene_id=476 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=116373205 | |start_of_center_position=116373205 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_000701 | + | |transcript_name=ENST00000295598.10 NM_000701 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_4819.1 | |tss_id=hg_4819.1 | ||
Revision as of 02:09, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116373205 |
|---|---|
| End of the center position in the TSS region: | 116373206 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000295598.10 NM_000701 |
|---|---|
| Distance: | 30 |
| Num_trans: | 13 |
| All_trans: | ENST00000295598.10:30 NM_000701:30 BC003077:46 BC050359:48 ENST00000488733.1:55 D00099:75 X04297:75 AK314777:114 AK308418:194 LF352804:223 MA588381:223 EU176649:293 DQ891882:293 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_000701 |
| Entrez ID: | 476 |
| Nearest Unigene: | Hs.371889 |
| Nearest Refseq: | NM_000701 |
| Nearest Ensembl: | ENSG00000163399 |
| Gene Name: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Alias: | CMT2DD|HOMGSMR2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
