Difference between revisions of "TSS:Hg 100602.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000475323.5:0 | + | |all_trans=ENST00000475323.5:0 ENST00000378387.4:0 ENST00000490970.5:0 NM_032818:0 AK027548:0 AK225501:0 AK225529:0 BC033666:0 KJ895049:0 CU689686:0 AK303513:0 AY390225:-58 AY390226:-58 ENST00000468876.1:341 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-4 |
|end=35665229 | |end=35665229 | ||
|end_of_center_position=35665199 | |end_of_center_position=35665199 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032818 | |nearest_refseq=NM_032818 | ||
|nearest_unigene=Hs.534579 | |nearest_unigene=Hs.534579 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=35665168 | |start=35665168 | ||
|start_of_center_position=35665198 | |start_of_center_position=35665198 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000475323.5 ENST00000490970.5 | + | |transcript_name=ENST00000475323.5 ENST00000378387.4 ENST00000490970.5 NM_032818 AK027548 AK225501 AK225529 BC033666 KJ895049 CU689686 AK303513 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100602.1 | |tss_id=hg_100602.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35665198 |
|---|---|
| End of the center position in the TSS region: | 35665199 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000475323.5 ENST00000378387.4 ENST00000490970.5 NM_032818 AK027548 AK225501 AK225529 BC033666 KJ895049 CU689686 AK303513 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000475323.5:0 ENST00000378387.4:0 ENST00000490970.5:0 NM_032818:0 AK027548:0 AK225501:0 AK225529:0 BC033666:0 KJ895049:0 CU689686:0 AK303513:0 AY390225:-58 AY390226:-58 ENST00000468876.1:341 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_032818 |
| Entrez ID: | 84904 |
| Nearest Unigene: | Hs.534579 |
| Nearest Refseq: | NM_032818 |
| Nearest Ensembl: | ENSG00000137135 |
| Gene Name: | Rho guanine nucleotide exchange factor 39 |
| Gene Alias: | C9orf100 |
| Gene Description: | Rho guanine nucleotide exchange factor 39 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
