Difference between revisions of "TSS:Hg 100649.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TLN= | |TLN= | ||
| − | |all_trans=AB028950:0 BC021005:5 | + | |all_trans=AB028950:0 BC021005:5 LF354355:-61 MA589932:-61 LF354354:162 MA589931:162 ENST00000314888.10:171 NM_006289:171 BC042923:185 AF078828:217 AF177198:235 ENST00000378192.2:262 BC020881:262 LF206432:-266 MA442009:-266 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-180 |
|end=35732384 | |end=35732384 | ||
|end_of_center_position=35732375 | |end_of_center_position=35732375 | ||
|entrez_id=7094 | |entrez_id=7094 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=ILWEQ | + | |gene_alias=ILWEQ|TLN|talin-1 |
|gene_description=talin 1 | |gene_description=talin 1 | ||
|gene_id=7094 | |gene_id=7094 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006289 | |nearest_refseq=NM_006289 | ||
|nearest_unigene=Hs.471014 | |nearest_unigene=Hs.471014 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=35732365 | |start=35732365 | ||
Revision as of 15:24, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35732374 |
|---|---|
| End of the center position in the TSS region: | 35732375 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB028950 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AB028950:0 BC021005:5 LF354355:-61 MA589932:-61 LF354354:162 MA589931:162 ENST00000314888.10:171 NM_006289:171 BC042923:185 AF078828:217 AF177198:235 ENST00000378192.2:262 BC020881:262 LF206432:-266 MA442009:-266 |
TATA-Box annotation
| Distance to TSS: | -180 |
|---|---|
| Nearest PromoterID: | NM_006289 |
| Entrez ID: | 7094 |
| Nearest Unigene: | Hs.471014 |
| Nearest Refseq: | NM_006289 |
| Nearest Ensembl: | ENSG00000137076 |
| Gene Name: | talin 1 |
| Gene Alias: | ILWEQ |
| Gene Description: | talin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
