Difference between revisions of "TSS:Hg 219758.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Tom5= | |Tom5= | ||
| − | |all_trans= | + | |all_trans=LF354528:-33 MA590105:-33 ENST00000541804.1:-47 ENST00000544475.5:-47 BC125124:-47 BC125125:-47 LF354527:291 MA590104:291 |
|bA613M10.3= | |bA613M10.3= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance=- | + | |distance=-33 |
| − | |distance_to_tss= | + | |distance_to_tss=3770 |
|end=37588827 | |end=37588827 | ||
|end_of_center_position=37588827 | |end_of_center_position=37588827 | ||
|entrez_id=401505 | |entrez_id=401505 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=C9orf105 | + | |gene_alias=C9orf105{{!}}Tom5{{!}}bA613M10.3 |
|gene_description=translocase of outer mitochondrial membrane 5 | |gene_description=translocase of outer mitochondrial membrane 5 | ||
|gene_id=26267 | |gene_id=26267 | ||
| − | |gene_name= | + | |gene_name=TOMM5 |
|gene_source=HGNC:13589 | |gene_source=HGNC:13589 | ||
|gene_symbol=FBXO10 | |gene_symbol=FBXO10 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:13589 | |hgnc_mgi_id=HGNC:13589 | ||
|nearest_ensembl=ENSG00000175768 | |nearest_ensembl=ENSG00000175768 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001790 |
|nearest_refseq=NM_001001790 | |nearest_refseq=NM_001001790 | ||
|nearest_unigene=Hs.130774 | |nearest_unigene=Hs.130774 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=37588826 | |start=37588826 | ||
|start_of_center_position=37588826 | |start_of_center_position=37588826 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF354528 MA590105 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219758.1 | |tss_id=hg_219758.1 | ||
Latest revision as of 08:17, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 37588826 |
|---|---|
| End of the center position in the TSS region: | 37588827 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354528 MA590105 |
|---|---|
| Distance: | -33 |
| Num_trans: | 8 |
| All_trans: | LF354528:-33 MA590105:-33 ENST00000541804.1:-47 ENST00000544475.5:-47 BC125124:-47 BC125125:-47 LF354527:291 MA590104:291 |
TATA-Box annotation
| Distance to TSS: | 3770 |
|---|---|
| Nearest PromoterID: | NM_001001790 |
| Entrez ID: | 401505 |
| Nearest Unigene: | Hs.130774 |
| Nearest Refseq: | NM_001001790 |
| Nearest Ensembl: | ENSG00000175768 |
| Gene Name: | TOMM5 |
| Gene Alias: | C9orf105|Tom5|bA613M10.3 |
| Gene Description: | translocase of outer mitochondrial membrane 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
