Difference between revisions of "TSS:Hg 100741.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Tom5= | |Tom5= | ||
| − | |all_trans=AB435233:4 KJ896253:6 BC034247:-10 ENST00000544379.1:-35 | + | |all_trans=AB435233:4 KJ896253:6 BC034247:-10 ENST00000544379.1:-35 ENST00000321301.7:-36 ENST00000377773.9:-36 NM_001001790:-36 BC029423:-36 ENST00000401811.3:-43 LF206447:-48 MA442024:-48 ENST00000537239.2:67 ENST00000540941.1:67 CR627326:67 NM_001134485:-78 NM_001134484:-78 |
|bA613M10.3= | |bA613M10.3= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=4 | |distance=4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=49 |
|end=37592561 | |end=37592561 | ||
|end_of_center_position=37592549 | |end_of_center_position=37592549 | ||
|entrez_id=401505 | |entrez_id=401505 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=C9orf105 | + | |gene_alias=C9orf105|Tom5|bA613M10.3 |
|gene_description=translocase of outer mitochondrial membrane 5 | |gene_description=translocase of outer mitochondrial membrane 5 | ||
|gene_id=401505 | |gene_id=401505 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:31369 | |hgnc_mgi_id=HGNC:31369 | ||
|nearest_ensembl=ENSG00000175768 | |nearest_ensembl=ENSG00000175768 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001790 |
|nearest_refseq=NM_001001790 | |nearest_refseq=NM_001001790 | ||
|nearest_unigene=Hs.130774 | |nearest_unigene=Hs.130774 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=37592535 | |start=37592535 | ||
Revision as of 15:27, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 37592548 |
|---|---|
| End of the center position in the TSS region: | 37592549 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB435233 |
|---|---|
| Distance: | 4 |
| Num_trans: | 16 |
| All_trans: | AB435233:4 KJ896253:6 BC034247:-10 ENST00000544379.1:-35 ENST00000321301.7:-36 ENST00000377773.9:-36 NM_001001790:-36 BC029423:-36 ENST00000401811.3:-43 LF206447:-48 MA442024:-48 ENST00000537239.2:67 ENST00000540941.1:67 CR627326:67 NM_001134485:-78 NM_001134484:-78 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_001001790 |
| Entrez ID: | 401505 |
| Nearest Unigene: | Hs.130774 |
| Nearest Refseq: | NM_001001790 |
| Nearest Ensembl: | ENSG00000175768 |
| Gene Name: | translocase of outer mitochondrial membrane 5 |
| Gene Alias: | C9orf105 |
| Gene Description: | translocase of outer mitochondrial membrane 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
